Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
THBS1P07996 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
THBS1P07996 RNU6-170P-201ENST00000362832 104 ntBASIC3.29□□□□□ -1.88
THBS1P07996 RNU6-832P-201ENST00000363319 107 ntBASIC3.29□□□□□ -1.88
THBS1P07996 SNORA18-201ENST00000384416 132 ntBASIC3.29□□□□□ -1.88
THBS1P07996 MIR95-201ENST00000385072 81 ntBASIC3.29□□□□□ -1.88
THBS1P07996 AL022718.1-201ENST00000412004 84 ntBASIC3.29□□□□□ -1.88
THBS1P07996 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.29□□□□□ -1.88
THBS1P07996 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.29□□□□□ -1.88
THBS1P07996 AC113410.1-201ENST00000505029 247 ntBASIC3.29□□□□□ -1.88
THBS1P07996 SNORA48.11-201ENST00000517015 89 ntBASIC3.29□□□□□ -1.88
THBS1P07996 AC022254.1-201ENST00000567857 235 ntBASIC3.29□□□□□ -1.88
THBS1P07996 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
THBS1P07996 AC019176.2-201ENST00000611579 315 ntBASIC3.29□□□□□ -1.88
THBS1P07996 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.29□□□□□ -1.88
THBS1P07996 U7.3-201ENST00000616123 62 ntBASIC3.29□□□□□ -1.88
THBS1P07996 AC022149.2-201ENST00000621061 203 ntBASIC3.29□□□□□ -1.88
THBS1P07996 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
THBS1P07996 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
THBS1P07996 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
THBS1P07996 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
THBS1P07996 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
THBS1P07996 SNORD45B-201ENST00000364617 72 ntBASIC3.28□□□□□ -1.88
THBS1P07996 RNU6-675P-201ENST00000384236 104 ntBASIC3.28□□□□□ -1.88
THBS1P07996 SNORD116-22-201ENST00000384430 92 ntBASIC3.28□□□□□ -1.88
THBS1P07996 MIR183-201ENST00000384958 110 ntBASIC3.28□□□□□ -1.88
THBS1P07996 RNA5SP467-201ENST00000391274 118 ntBASIC3.28□□□□□ -1.88
THBS1P07996 FO393413.1-201ENST00000402892 195 ntBASIC3.28□□□□□ -1.88
THBS1P07996 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.28□□□□□ -1.88
THBS1P07996 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.28□□□□□ -1.88
THBS1P07996 AC009414.1-201ENST00000427200 443 ntBASIC3.28□□□□□ -1.88
THBS1P07996 SNRPGP14-201ENST00000435400 219 ntBASIC3.28□□□□□ -1.88
THBS1P07996 RPS23P4-201ENST00000487908 423 ntBASIC3.28□□□□□ -1.88
THBS1P07996 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.28□□□□□ -1.88
THBS1P07996 AC026333.2-201ENST00000542164 106 ntBASIC3.28□□□□□ -1.88
THBS1P07996 AC007179.3-201ENST00000604976 235 ntBASIC3.28□□□□□ -1.88
THBS1P07996 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
THBS1P07996 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
THBS1P07996 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.27□□□□□ -1.89
THBS1P07996 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
THBS1P07996 RNA5SP139-201ENST00000364340 117 ntBASIC3.27□□□□□ -1.89
THBS1P07996 Y_RNA.244-201ENST00000364484 109 ntBASIC3.27□□□□□ -1.89
THBS1P07996 SNORA14A-201ENST00000364773 135 ntBASIC3.27□□□□□ -1.89
THBS1P07996 Y_RNA.333-201ENST00000365274 102 ntBASIC3.27□□□□□ -1.89
THBS1P07996 RNU6-279P-201ENST00000391297 101 ntBASIC3.27□□□□□ -1.89
THBS1P07996 ATP5A1P2-201ENST00000412323 255 ntBASIC3.27□□□□□ -1.89
THBS1P07996 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC3.27□□□□□ -1.89
THBS1P07996 RPL23AP83-201ENST00000434984 473 ntBASIC3.27□□□□□ -1.89
THBS1P07996 CYCSP35-201ENST00000451978 304 ntBASIC3.27□□□□□ -1.89
THBS1P07996 SNORD105B-201ENST00000458770 79 ntBASIC3.27□□□□□ -1.89
THBS1P07996 RNU2-11P-201ENST00000459191 187 ntBASIC3.27□□□□□ -1.89
THBS1P07996 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.27□□□□□ -1.89
THBS1P07996 MIR3618-201ENST00000580330 88 ntBASIC3.27□□□□□ -1.89
THBS1P07996 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.27□□□□□ -1.89
THBS1P07996 AL356280.1-201ENST00000603614 379 ntBASIC3.27□□□□□ -1.89
THBS1P07996 YPEL5P2-201ENST00000605553 359 ntBASIC3.27□□□□□ -1.89
THBS1P07996 MIR203B-201ENST00000636080 86 ntBASIC3.27□□□□□ -1.89
THBS1P07996 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
THBS1P07996 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.27□□□□□ -1.89
THBS1P07996 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
THBS1P07996 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
THBS1P07996 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
THBS1P07996 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
THBS1P07996 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
THBS1P07996 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.26□□□□□ -1.89
THBS1P07996 MIR340-201ENST00000362125 95 ntBASIC3.26□□□□□ -1.89
THBS1P07996 RNU4-67P-201ENST00000364569 141 ntBASIC3.26□□□□□ -1.89
THBS1P07996 RNA5SP51-201ENST00000364750 119 ntBASIC3.26□□□□□ -1.89
THBS1P07996 RNU6-497P-201ENST00000365316 104 ntBASIC3.26□□□□□ -1.89
THBS1P07996 Y_RNA.360-201ENST00000365512 102 ntBASIC3.26□□□□□ -1.89
THBS1P07996 RNU6-644P-201ENST00000391155 98 ntBASIC3.26□□□□□ -1.89
THBS1P07996 RNA5SP482-201ENST00000391269 118 ntBASIC3.26□□□□□ -1.89
THBS1P07996 RN7SL636P-201ENST00000497504 294 ntBASIC3.26□□□□□ -1.89
THBS1P07996 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.26□□□□□ -1.89
THBS1P07996 SNORD45.4-201ENST00000516629 73 ntBASIC3.26□□□□□ -1.89
THBS1P07996 RNU7-28P-201ENST00000516759 62 ntBASIC3.26□□□□□ -1.89
THBS1P07996 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.26□□□□□ -1.89
THBS1P07996 AL161756.2-201ENST00000604597 246 ntBASIC3.26□□□□□ -1.89
THBS1P07996 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.26□□□□□ -1.89
THBS1P07996 AC087741.2-201ENST00000619415 172 ntBASIC3.26□□□□□ -1.89
THBS1P07996 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
THBS1P07996 MIR7153-201ENST00000637758 57 ntBASIC3.26□□□□□ -1.89
THBS1P07996 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.26□□□□□ -1.89
THBS1P07996 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
THBS1P07996 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
THBS1P07996 Z83843.1-201ENST00000604070 3685 ntBASIC3.25□□□□□ -1.89
THBS1P07996 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
THBS1P07996 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
THBS1P07996 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
THBS1P07996 SNORA8-201ENST00000384574 139 ntBASIC3.25□□□□□ -1.89
THBS1P07996 MIR34B-201ENST00000385076 84 ntBASIC3.25□□□□□ -1.89
THBS1P07996 MIR577-201ENST00000385196 96 ntBASIC3.25□□□□□ -1.89
THBS1P07996 RN7SKP200-201ENST00000410564 320 ntBASIC3.25□□□□□ -1.89
THBS1P07996 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.25□□□□□ -1.89
THBS1P07996 RNA5SP57-201ENST00000459463 123 ntBASIC3.25□□□□□ -1.89
THBS1P07996 RNU6-1041P-201ENST00000516254 102 ntBASIC3.25□□□□□ -1.89
THBS1P07996 SNORA70.19-201ENST00000516717 90 ntBASIC3.25□□□□□ -1.89
THBS1P07996 CTSLP2-204ENST00000629029 392 ntBASIC3.25□□□□□ -1.89
THBS1P07996 U6.105-201ENST00000637379 88 ntBASIC3.25□□□□□ -1.89
THBS1P07996 U6.108-201ENST00000637764 58 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms