Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL445646.1-201ENST00000431784 216 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 snoU13.23-201ENST00000458863 104 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 RPS27P22-201ENST00000478056 241 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DOAP06340 AC015720.1-201ENST00000565251 277 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 DEFB122-202ENST00000569013 197 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 MIR4724-201ENST00000579485 89 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 AP003357.1-201ENST00000604497 148 ntBASIC2.48□□□□□ -2.01
HLA-DOAP06340 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DOAP06340 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DOAP06340 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DOAP06340 ZNF702P-202ENST00000434269 1966 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 RNY1P11-201ENST00000363759 113 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 RNU6-117P-201ENST00000365415 107 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 SNORA25B-201ENST00000365507 128 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 RNU6-1235P-201ENST00000384559 107 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HLA-DOAP06340 RNU6-239P-201ENST00000390990 99 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 MIR548I2-201ENST00000408348 149 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 AC006461.1-201ENST00000412637 326 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 EBAG9P1-201ENST00000418955 543 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DOAP06340 AC074290.1-201ENST00000448883 135 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 AL121914.1-201ENST00000450188 156 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 HSPE1P13-201ENST00000451143 297 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 RNU6-498P-201ENST00000459468 107 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 RPL23AP54-201ENST00000495129 419 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.47□□□□□ -2.01
HLA-DOAP06340 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DOAP06340 MIR4431-201ENST00000579990 94 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 AL031274.2-201ENST00000599419 203 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 Y_RNA.778-201ENST00000620203 90 ntBASIC2.47□□□□□ -2.01
HLA-DOAP06340 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DOAP06340 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
HLA-DOAP06340 MIR367-201ENST00000362299 68 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 RNU6-103P-201ENST00000363686 107 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 RNU6-1240P-201ENST00000365155 104 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 RNU4-11P-201ENST00000365287 132 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 Y_RNA.488-201ENST00000384403 102 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 Y_RNA.497-201ENST00000384447 98 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 MIR569-201ENST00000385228 96 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 Y_RNA.622-201ENST00000411091 108 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 SNORA4.4-201ENST00000515921 135 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 RNU7-121P-201ENST00000516604 62 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 AC127455.1-201ENST00000565496 145 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 MIR3616-201ENST00000584070 92 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 AL929325.1-201ENST00000603096 117 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 AC005972.2-201ENST00000604690 348 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 AC010297.1-201ENST00000623948 149 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 MTND1P7-201ENST00000632801 297 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 AC100821.1-201ENST00000523153 2479 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 AL159152.1-201ENST00000635019 2587 ntBASIC2.46□□□□□ -2.02
HLA-DOAP06340 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DOAP06340 AC245060.5-201ENST00000610778 3293 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
HLA-DOAP06340 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 SNORD114-7-201ENST00000362520 77 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 Y_RNA.332-201ENST00000365271 113 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 SNORD50.2-201ENST00000365465 70 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 Y_RNA.568-201ENST00000384742 113 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 MIR15B-201ENST00000385045 98 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 AC123900.1-201ENST00000420390 96 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 AC060773.1-201ENST00000421698 310 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 AL591806.2-201ENST00000433122 173 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 AL162725.1-201ENST00000435405 301 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 RPL23AP42-201ENST00000471152 471 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 AP001485.1-201ENST00000604799 199 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 AC022202.1-201ENST00000613515 211 ntBASIC2.45□□□□□ -2.02
HLA-DOAP06340 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DOAP06340 RNU1-22P-201ENST00000363334 158 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 RNU6-271P-201ENST00000363858 105 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 Y_RNA.291-201ENST00000364886 113 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 RNU6-81P-201ENST00000365608 104 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 RNU6-1323P-201ENST00000384025 107 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DOAP06340 AC005840.1-201ENST00000498412 377 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 RNU6-237P-201ENST00000515985 71 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 SNORA25.12-201ENST00000516202 82 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.44□□□□□ -2.02
HLA-DOAP06340 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.44□□□□□ -2.02
HLA-DOAP06340 MIR3684-201ENST00000579779 74 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 MIR4438-201ENST00000585271 93 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
HLA-DOAP06340 ZNF355P-201ENST00000427301 3216 ntBASIC2.44□□□□□ -2.02
HLA-DOAP06340 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HLA-DOAP06340 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.43□□□□□ -2.02
HLA-DOAP06340 SNORD114-6-201ENST00000364393 72 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 RNU6-1336P-201ENST00000383886 109 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 RNU6-144P-201ENST00000383951 107 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 RNU6-1072P-201ENST00000384703 107 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 RNU6-443P-201ENST00000384780 107 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 MIR1262-201ENST00000408276 93 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 AC009238.1-201ENST00000442165 424 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 RPS4XP11-201ENST00000446897 772 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 AC009237.6-201ENST00000446969 424 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 RNU7-26P-201ENST00000458980 63 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 AC108210.2-201ENST00000503681 201 ntBASIC2.43□□□□□ -2.02
HLA-DOAP06340 MIR4769-201ENST00000584126 77 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms