Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MIR6079-201ENST00000635807 62 ntBASIC1.35□□□□□ -2.19
MT-ND1P03886 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
MT-ND1P03886 RNA5SP190-201ENST00000365222 118 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 Y_RNA.418-201ENST00000384029 102 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 Y_RNA.541-201ENST00000384640 113 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 RNU6-376P-201ENST00000384731 106 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
MT-ND1P03886 RNU6-440P-201ENST00000390882 105 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 Y_RNA.581-201ENST00000391017 97 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 RNU6-1109P-201ENST00000391187 107 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 AC245047.3-201ENST00000429428 127 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 DYNLT3P2-201ENST00000442517 295 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 snoU13.27-201ENST00000459278 104 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 AC099513.1-201ENST00000490423 301 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 SNORA40.15-201ENST00000516884 107 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 Y_RNA.720-201ENST00000517166 92 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.34□□□□□ -2.19
MT-ND1P03886 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.34□□□□□ -2.19
MT-ND1P03886 MIR4719-201ENST00000585233 84 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 AL353621.2-201ENST00000605340 133 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 AC004832.4-201ENST00000608952 331 ntBASIC1.34□□□□□ -2.19
MT-ND1P03886 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.33□□□□□ -2.2
MT-ND1P03886 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.33□□□□□ -2.2
MT-ND1P03886 Y_RNA.310-201ENST00000365063 113 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
MT-ND1P03886 MIR1289-2-201ENST00000408360 111 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 MIR548F4-201ENST00000408515 105 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 OOSP1P1-201ENST00000423265 274 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 AL162725.1-201ENST00000435405 301 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 RPS4XP11-201ENST00000446897 772 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 RPS20P10-201ENST00000451209 253 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 HMGN1P10-201ENST00000474557 553 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 SNORA70.12-201ENST00000516084 153 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 RNU6-1278P-201ENST00000516130 107 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 RNU6-1291P-201ENST00000516591 104 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.33□□□□□ -2.2
MT-ND1P03886 AP003733.2-201ENST00000529409 171 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 RPL21P9-201ENST00000556149 474 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 AC008737.2-201ENST00000599446 118 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 AL360085.1-201ENST00000604713 532 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
MT-ND1P03886 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
MT-ND1P03886 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
MT-ND1P03886 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
MT-ND1P03886 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
MT-ND1P03886 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MT-ND1P03886 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
MT-ND1P03886 Y_RNA.16-201ENST00000362421 102 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 RNU4-80P-201ENST00000363200 141 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 Y_RNA.267-201ENST00000364679 109 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 MIR194-1-201ENST00000384892 85 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 COX6CP10-201ENST00000416832 224 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 POLR2KP2-201ENST00000438155 177 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 AC027119.1-201ENST00000440877 241 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 AL731563.1-201ENST00000442202 214 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 snoU13.26-201ENST00000459452 105 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 RNU6-341P-201ENST00000516973 96 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 RNU6-1096P-201ENST00000517089 102 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 SNORA31.24-201ENST00000517232 57 ntBASIC1.32□□□□□ -2.2
MT-ND1P03886 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.32□□□□□ -2.2
MT-ND1P03886 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.32□□□□□ -2.2
MT-ND1P03886 SNORA1B-201ENST00000362535 133 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 U8.1-201ENST00000362843 134 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 Y_RNA.84-201ENST00000363011 104 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 Y_RNA.145-201ENST00000363527 102 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 Y_RNA.152-201ENST00000363578 100 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 RNU6-60P-201ENST00000364792 103 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 SNORD26-201ENST00000384147 75 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 RNU6-1031P-201ENST00000384773 107 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 RNU6-855P-201ENST00000410395 104 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 RNU7-94P-201ENST00000459576 63 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.31□□□□□ -2.2
MT-ND1P03886 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.31□□□□□ -2.2
MT-ND1P03886 MIR3937-201ENST00000580135 106 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 AC021506.2-201ENST00000612354 169 ntBASIC1.31□□□□□ -2.2
MT-ND1P03886 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
MT-ND1P03886 RNU4-90P-201ENST00000362773 141 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 RNU6-238P-201ENST00000363313 106 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 RNU4-13P-201ENST00000364019 141 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 RNU6-1048P-201ENST00000364054 107 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 RNU6-801P-201ENST00000364087 105 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 Y_RNA.341-201ENST00000365341 102 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 Y_RNA.368-201ENST00000365547 113 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 RNU2-14P-201ENST00000411053 191 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.3□□□□□ -2.2
MT-ND1P03886 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
MT-ND1P03886 MTCO1P5-201ENST00000433573 344 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 SNRPGP13-201ENST00000442212 177 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 AC233266.1-201ENST00000454518 96 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 SNORD13-201ENST00000459299 104 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 RNU6-191P-201ENST00000516295 94 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 RNU6-635P-201ENST00000516651 102 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 MIR4709-201ENST00000577272 72 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 AC015688.6-201ENST00000577737 104 ntBASIC1.3□□□□□ -2.2
MT-ND1P03886 AC242852.1-201ENST00000612151 96 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms