Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC006380.1-201ENST00000603598 186 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 AC040896.1-201ENST00000613819 479 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 MIR8054-201ENST00000620877 86 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 AC090574.1-201ENST00000623186 233 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.34□□□□□ -2.19
PDGFBP01127 AL606534.2-204ENST00000635008 178 ntBASIC1.34□□□□□ -2.19
PDGFBP01127 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
PDGFBP01127 AC018630.2-201ENST00000534866 2403 ntBASIC1.34□□□□□ -2.2
PDGFBP01127 Y_RNA.27-201ENST00000362540 103 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 RNU6-450P-201ENST00000364654 107 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 RNY1P4-201ENST00000384595 115 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 MIR513A1-201ENST00000385138 129 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 RPS27P1-201ENST00000450552 247 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 AC097462.1-201ENST00000514125 324 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 uc_338.22-201ENST00000622722 187 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 AC127459.3-201ENST00000624328 466 ntBASIC1.33□□□□□ -2.2
PDGFBP01127 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
PDGFBP01127 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
PDGFBP01127 Y_RNA.143-201ENST00000363520 106 ntBASIC1.32□□□□□ -2.2
PDGFBP01127 Y_RNA.252-201ENST00000364556 101 ntBASIC1.32□□□□□ -2.2
PDGFBP01127 Y_RNA.265-201ENST00000364677 108 ntBASIC1.32□□□□□ -2.2
PDGFBP01127 Y_RNA.446-201ENST00000384178 104 ntBASIC1.32□□□□□ -2.2
PDGFBP01127 MRPL42P3-201ENST00000401492 326 ntBASIC1.32□□□□□ -2.2
PDGFBP01127 RNU4-30P-201ENST00000410245 143 ntBASIC1.32□□□□□ -2.2
PDGFBP01127 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.32□□□□□ -2.2
PDGFBP01127 RNU6-397P-201ENST00000516226 104 ntBASIC1.32□□□□□ -2.2
PDGFBP01127 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.32□□□□□ -2.2
PDGFBP01127 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.32□□□□□ -2.2
PDGFBP01127 MIR6079-201ENST00000635807 62 ntBASIC1.32□□□□□ -2.2
PDGFBP01127 Y_RNA.61-201ENST00000362835 102 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 Y_RNA.178-201ENST00000363832 102 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 RNU6-1175P-201ENST00000365200 107 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 Y_RNA.424-201ENST00000384063 103 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 Y_RNA.431-201ENST00000384086 102 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 Y_RNA.471-201ENST00000384312 102 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 RNU6-937P-201ENST00000384325 106 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 RNU6-505P-201ENST00000384427 107 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 RNA5SP511-201ENST00000410487 115 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 RNU7-110P-201ENST00000516891 62 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 RN7SKP295-201ENST00000517264 153 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 AC106754.2-201ENST00000623006 233 ntBASIC1.31□□□□□ -2.2
PDGFBP01127 MIR26B-201ENST00000362251 77 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 Y_RNA.138-201ENST00000363462 102 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 SNORD115-30-201ENST00000364117 82 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 Y_RNA.216-201ENST00000364205 93 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 SNORD14.1-201ENST00000365609 90 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 RNU6-474P-201ENST00000384243 107 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 MIR873-201ENST00000401120 77 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 AL031003.1-201ENST00000404229 172 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 RN7SKP200-201ENST00000410564 320 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 AL137792.2-201ENST00000443484 235 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.3□□□□□ -2.2
PDGFBP01127 RNU2-56P-201ENST00000516826 190 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.3□□□□□ -2.2
PDGFBP01127 AC040926.1-201ENST00000530195 238 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 MIR4778-201ENST00000577635 80 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 RN7SL793P-201ENST00000583259 296 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 AC021506.2-201ENST00000612354 169 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 AC091925.1-201ENST00000623204 462 ntBASIC1.3□□□□□ -2.2
PDGFBP01127 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PDGFBP01127 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
PDGFBP01127 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
PDGFBP01127 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
PDGFBP01127 Y_RNA.172-201ENST00000363765 102 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 SNORA25.8-201ENST00000364831 128 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 Y_RNA.329-201ENST00000365209 107 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 Y_RNA.458-201ENST00000384240 102 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 RNU6-1031P-201ENST00000384773 107 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 RNU2-54P-201ENST00000410299 190 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 MCFD2P1-201ENST00000417812 300 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 MTCO2P12-201ENST00000427426 682 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.29□□□□□ -2.2
PDGFBP01127 RNU6-1337P-201ENST00000516525 95 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 RNU2-12P-201ENST00000517216 168 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 AC124312.5-201ENST00000604451 268 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 Y_RNA.772-201ENST00000606692 102 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 AL160413.1-201ENST00000622780 310 ntBASIC1.29□□□□□ -2.2
PDGFBP01127 AP000648.3-201ENST00000623539 4507 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 RNU4-41P-201ENST00000364426 143 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 Y_RNA.243-201ENST00000364481 109 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 Y_RNA.331-201ENST00000365267 102 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 Y_RNA.460-201ENST00000384255 102 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 SNORD116-13-201ENST00000384408 92 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 MIR150-201ENST00000385048 84 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 RNU6-1199P-201ENST00000411249 104 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.28□□□□□ -2.2
PDGFBP01127 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.28□□□□□ -2.2
PDGFBP01127 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.28□□□□□ -2.2
PDGFBP01127 MTND4P19-201ENST00000446659 478 ntBASIC1.28□□□□□ -2.2
PDGFBP01127 AC093850.1-201ENST00000454121 251 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms