Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC016909.1-201ENST00000415916 166 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 UBBP3-201ENST00000445497 241 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 AC003982.1-202ENST00000469928 248 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 RN7SL601P-201ENST00000471221 293 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 AC011406.1-201ENST00000512440 370 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 RNU6-1146P-201ENST00000516282 102 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.78□□□□□ -1.96
TRIM13O60858 AC011604.1-201ENST00000545978 196 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 SNORD115-40-201ENST00000606510 82 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 AC090517.3-201ENST00000625170 141 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 MIR2052-201ENST00000636055 55 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 MIR7515-201ENST00000637837 67 ntBASIC2.78□□□□□ -1.96
TRIM13O60858 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
TRIM13O60858 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
TRIM13O60858 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
TRIM13O60858 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
TRIM13O60858 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM13O60858 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM13O60858 MIR26A1-201ENST00000362205 77 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 RNY4P6-201ENST00000363667 96 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 SNORD61-201ENST00000384252 73 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 RPS27P22-201ENST00000478056 241 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 NDUFA4P2-201ENST00000489989 244 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 AC097462.1-201ENST00000514125 324 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 MIR449C-201ENST00000516047 92 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 SCARNA3-201ENST00000517097 143 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 IGKV3-31-201ENST00000523109 329 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.77□□□□□ -1.97
TRIM13O60858 MIR3117-201ENST00000584034 78 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 JPX_2.1-201ENST00000614161 69 ntBASIC2.77□□□□□ -1.97
TRIM13O60858 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM13O60858 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.77□□□□□ -1.97
TRIM13O60858 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM13O60858 AC096644.4-201ENST00000563417 2912 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM13O60858 Z82195.2-201ENST00000612348 18351 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 RNU6-888P-201ENST00000363010 101 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 SNORA68.1-201ENST00000364537 132 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 SNORD24-201ENST00000383884 75 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 RNU6-1235P-201ENST00000384559 107 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 MIR1289-1-201ENST00000408836 144 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 AC008134.1-201ENST00000420943 193 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 Z96811.1-201ENST00000445880 108 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 RNU6-498P-201ENST00000459468 107 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 RN7SL504P-201ENST00000494496 287 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 MRPS17P9-201ENST00000511924 393 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 AC096725.1-201ENST00000514266 313 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 RNU6-904P-201ENST00000516206 101 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 RNU6-1270P-201ENST00000517128 108 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 AC068339.1-201ENST00000526965 141 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 MIR3158-1-201ENST00000583596 81 ntBASIC2.76□□□□□ -1.97
TRIM13O60858 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.76□□□□□ -1.97
TRIM13O60858 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.76□□□□□ -1.97
TRIM13O60858 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
TRIM13O60858 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM13O60858 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM13O60858 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM13O60858 MIR494-201ENST00000349529 81 ntBASIC2.75□□□□□ -1.97
TRIM13O60858 SNORD31B-201ENST00000364977 69 ntBASIC2.75□□□□□ -1.97
TRIM13O60858 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM13O60858 SCGB1D5P-201ENST00000515134 247 ntBASIC2.75□□□□□ -1.97
TRIM13O60858 RNU6-948P-201ENST00000516374 107 ntBASIC2.75□□□□□ -1.97
TRIM13O60858 AC109329.2-201ENST00000519658 482 ntBASIC2.75□□□□□ -1.97
TRIM13O60858 ZNF861P-201ENST00000588126 639 ntBASIC2.75□□□□□ -1.97
TRIM13O60858 MIR3651-201ENST00000630427 90 ntBASIC2.75□□□□□ -1.97
TRIM13O60858 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.75□□□□□ -1.97
TRIM13O60858 Y_RNA.213-201ENST00000364178 111 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 SNORD56.5-201ENST00000364281 72 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 RNU6-1240P-201ENST00000365155 104 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 RNU6-234P-201ENST00000365229 104 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 Y_RNA.342-201ENST00000365352 113 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 SNORD77.3-201ENST00000391113 65 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 MIR1294-201ENST00000408503 142 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 RNU6-1328P-201ENST00000410938 106 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM13O60858 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 RPS26P48-201ENST00000491713 339 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 RNU6-240P-201ENST00000516098 97 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 RNU6-830P-201ENST00000516353 107 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 SNORA67.7-201ENST00000516664 135 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 AC026421.1-201ENST00000519101 163 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 AC141557.1-201ENST00000540982 400 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 MIR3199-1-201ENST00000582434 88 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
TRIM13O60858 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM13O60858 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.74□□□□□ -1.97
TRIM13O60858 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM13O60858 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
TRIM13O60858 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM13O60858 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
TRIM13O60858 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM13O60858 MIR302B-201ENST00000362188 73 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 RNY1P10-201ENST00000363268 113 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 RNU6-414P-201ENST00000363705 104 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 MIR548A2-201ENST00000384956 97 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 MIR592-201ENST00000384959 97 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 MIR218-1-201ENST00000384999 110 ntBASIC2.73□□□□□ -1.97
TRIM13O60858 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM13O60858 AC107297.1-201ENST00000459991 176 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 243.4 ms