Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
PRAMEF4O60810 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PRAMEF4O60810 DEFA7P-201ENST00000382676 285 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 SNORD116-18-201ENST00000383961 92 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 RNU6-1080P-201ENST00000383982 107 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 MIR597-201ENST00000384968 97 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 AL512604.1-201ENST00000404812 257 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 RNU4-43P-201ENST00000410628 137 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 AC007064.1-201ENST00000412238 351 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 RPS12P2-201ENST00000439728 269 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 AL392103.1-201ENST00000447000 198 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 TRBV12-1-201ENST00000479785 344 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 RPL23AP91-201ENST00000569211 455 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.36□□□□□ -2.03
PRAMEF4O60810 AL049779.4-201ENST00000604500 156 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 SNORD14A-201ENST00000606526 91 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
PRAMEF4O60810 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.36□□□□□ -2.03
PRAMEF4O60810 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PRAMEF4O60810 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
PRAMEF4O60810 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PRAMEF4O60810 RNU6-1209P-201ENST00000363655 107 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 SNORA67.1-201ENST00000364749 141 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 Y_RNA.357-201ENST00000365487 109 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 MIR196B-201ENST00000384852 84 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 MIR562-201ENST00000384894 95 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 RNU6-239P-201ENST00000390990 99 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 HMGN2P39-201ENST00000398005 273 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 AL121914.1-201ENST00000450188 156 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 RNU7-121P-201ENST00000516604 62 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 MIR2681-201ENST00000581814 105 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.35□□□□□ -2.03
PRAMEF4O60810 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PRAMEF4O60810 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 Y_RNA.253-201ENST00000364562 112 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 RNU6-728P-201ENST00000365375 104 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 RNU6-484P-201ENST00000384016 107 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 RNU6-643P-201ENST00000384018 107 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 Y_RNA.587-201ENST00000391210 103 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 AL606517.2-201ENST00000442855 241 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 RNU7-94P-201ENST00000459576 63 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 AC107027.2-201ENST00000512197 115 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 AL358944.1-201ENST00000528537 144 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 AL049861.1-201ENST00000603130 150 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 AC022217.4-201ENST00000604389 163 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
PRAMEF4O60810 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.34□□□□□ -2.03
PRAMEF4O60810 SNORA1B-201ENST00000362535 133 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 SNORD45.3-201ENST00000363836 72 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 Y_RNA.267-201ENST00000364679 109 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 RNU6-449P-201ENST00000383914 107 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 RNA5SP465-201ENST00000391195 109 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 AL359511.1-201ENST00000402970 211 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 RPS27P1-201ENST00000450552 247 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 AC233266.1-201ENST00000454518 96 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 SNORD77.4-201ENST00000516158 81 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 RNU6-346P-201ENST00000516288 111 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 AC242852.1-201ENST00000612151 96 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 AC244015.1-201ENST00000622301 99 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 MTND1P7-201ENST00000632801 297 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PRAMEF4O60810 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
PRAMEF4O60810 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PRAMEF4O60810 AC016717.2-201ENST00000609089 5141 ntBASIC2.33□□□□□ -2.04
PRAMEF4O60810 Y_RNA.111-201ENST00000363248 100 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 Y_RNA.621-201ENST00000411065 96 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 Y_RNA.622-201ENST00000411091 108 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 AC245047.4-201ENST00000433189 144 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 HMGN2P3-201ENST00000433603 273 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 HMGN2P5-201ENST00000436882 273 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 SNRPGP8-201ENST00000454064 226 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 NDUFA4P2-201ENST00000489989 244 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 AP002004.2-201ENST00000531656 154 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.32□□□□□ -2.04
PRAMEF4O60810 AC069114.2-201ENST00000604699 304 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 AC067747.1-201ENST00000608026 250 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 uc_338.4-201ENST00000616635 176 ntBASIC2.32□□□□□ -2.04
PRAMEF4O60810 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.32□□□□□ -2.04
PRAMEF4O60810 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.32□□□□□ -2.04
PRAMEF4O60810 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PRAMEF4O60810 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRAMEF4O60810 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
PRAMEF4O60810 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PRAMEF4O60810 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.31□□□□□ -2.04
PRAMEF4O60810 SNORA3A-201ENST00000364113 130 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 RNU1-52P-201ENST00000384190 164 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 RNU11-3P-201ENST00000391111 133 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 RNA5SP181-201ENST00000410246 98 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 HMGN1P7-201ENST00000491722 313 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 AC103810.6-201ENST00000606708 136 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 AC046143.2-201ENST00000609789 160 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 AL137847.3-201ENST00000611521 109 ntBASIC2.31□□□□□ -2.04
PRAMEF4O60810 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
PRAMEF4O60810 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRAMEF4O60810 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PRAMEF4O60810 RNU6-1019P-201ENST00000364424 107 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms