Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 ZNF271P-202ENST00000465539 1970 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 Y_RNA.435-201ENST00000384095 112 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 MIR562-201ENST00000384894 95 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 AC117454.1-201ENST00000491120 168 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 RNU7-193P-201ENST00000516723 65 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 AL358944.1-201ENST00000528537 144 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 MIR4529-201ENST00000578110 78 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 AC069114.2-201ENST00000604699 304 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 MIR6845-201ENST00000613182 61 ntBASIC2.74□□□□□ -1.97
CCDC85CA6NKD9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 Y_RNA.29-201ENST00000362570 113 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 SNORD114-26-201ENST00000363543 72 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 RNU6-1205P-201ENST00000363625 106 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 RNU4-13P-201ENST00000364019 141 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 SNORA36B-201ENST00000410438 131 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 RNU6-341P-201ENST00000516973 96 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 SNORA81.3-201ENST00000517283 198 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 MIR4446-201ENST00000578505 67 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 MIR6079-201ENST00000635807 62 ntBASIC2.73□□□□□ -1.97
CCDC85CA6NKD9 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 SNORA8-201ENST00000384574 139 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 RNA5SP450-201ENST00000411206 102 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 Y_RNA.644-201ENST00000459006 113 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 AL163195.1-201ENST00000496941 348 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 Y_RNA.674-201ENST00000516362 113 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 MIR6734-201ENST00000621166 68 ntBASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC85CA6NKD9 MIR626-201ENST00000385032 94 ntBASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 RNA5SP323-201ENST00000391094 133 ntBASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 RN7SKP58-201ENST00000411010 305 ntBASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 RNA5SP344-201ENST00000411081 104 ntBASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 AC245047.4-201ENST00000433189 144 ntBASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 AC069257.2-201ENST00000441819 155 ntBASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 RNU6-1096P-201ENST00000517089 102 ntBASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 Y_RNA.802-201ENST00000614892 130 ntBASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC85CA6NKD9 SNORA8.3-201ENST00000384679 139 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 POLR2J4-204ENST00000418424 324 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 SUMO1P4-201ENST00000429430 302 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 Z98949.2-201ENST00000440996 144 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 RNU6-437P-201ENST00000459408 95 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 AC091021.1-201ENST00000468051 388 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 RNU6-182P-201ENST00000516970 105 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 RNU2-19P-201ENST00000517288 84 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 MIR219B-201ENST00000637023 88 ntBASIC2.7□□□□□ -1.98
CCDC85CA6NKD9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 RNU1-51P-201ENST00000365345 176 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 RNU4-17P-201ENST00000365598 141 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 MIR524-201ENST00000385242 87 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 RNU6-918P-201ENST00000391219 106 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 RPS27P1-201ENST00000450552 247 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 RNU7-120P-201ENST00000459334 63 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 HMGB3P3-201ENST00000510526 400 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 AC245166.1-201ENST00000521012 253 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 AC011604.1-201ENST00000545978 196 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 SUB1P4-201ENST00000566062 339 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 AC078899.2-201ENST00000595282 212 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 AL078603.1-201ENST00000603824 313 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 AC098479.1-201ENST00000609225 154 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 U1.36-201ENST00000620684 176 ntBASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC85CA6NKD9 RNU6-1020P-201ENST00000363684 107 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 Y_RNA.178-201ENST00000363832 102 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 SNORA63D-201ENST00000364359 132 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 SNORA67.1-201ENST00000364749 141 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 Y_RNA.293-201ENST00000364908 93 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 RNU6-381P-201ENST00000391259 108 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 RNA5SP501-201ENST00000410990 112 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 RPL23AP54-201ENST00000495129 419 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 AC026436.1-201ENST00000510537 270 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 RNVU1-2-201ENST00000516326 135 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 AC084364.2-201ENST00000546924 395 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 MIR4724-201ENST00000579485 89 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 MIR4308-201ENST00000580634 81 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 AC004792.1-201ENST00000614523 137 ntBASIC2.68□□□□□ -1.98
CCDC85CA6NKD9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 RNU6-136P-201ENST00000384663 107 ntBASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 MIR583-201ENST00000384846 75 ntBASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC85CA6NKD9 Y_RNA.793-201ENST00000411222 111 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms