Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 RNA5SP490-201ENST00000517141 136 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.73□□□□□ -1.97
SH3D21A4FU49 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SH3D21A4FU49 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SH3D21A4FU49 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SH3D21A4FU49 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SH3D21A4FU49 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SH3D21A4FU49 SNORA5B-201ENST00000363786 132 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 MIR562-201ENST00000384894 95 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 MIR624-201ENST00000385217 97 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 U6atac.2-201ENST00000408644 118 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.72□□□□□ -1.97
SH3D21A4FU49 AC107083.1-201ENST00000439643 279 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 RNU6-365P-201ENST00000517113 106 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.72□□□□□ -1.97
SH3D21A4FU49 MIR4446-201ENST00000578505 67 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 AC090115.4-201ENST00000609970 188 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.72□□□□□ -1.97
SH3D21A4FU49 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SH3D21A4FU49 MIR7515-201ENST00000637837 67 ntBASIC2.72□□□□□ -1.97
SH3D21A4FU49 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
SH3D21A4FU49 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SH3D21A4FU49 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.71□□□□□ -1.97
SH3D21A4FU49 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.71□□□□□ -1.97
SH3D21A4FU49 AC073325.2-201ENST00000339545 159 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 Y_RNA.495-201ENST00000384435 112 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 MIR1253-201ENST00000408273 105 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 AC063976.3-201ENST00000426849 329 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 RNU2-34P-201ENST00000516534 121 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 SNORA31.15-201ENST00000516771 132 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 RNU6-1096P-201ENST00000517089 102 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 AC007751.1-201ENST00000529260 376 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 MIR4662B-201ENST00000579498 81 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 MIR3129-201ENST00000581095 76 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 uc_338.28-201ENST00000612082 187 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
SH3D21A4FU49 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.71□□□□□ -1.98
SH3D21A4FU49 MTND5P18-201ENST00000445624 1801 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 Z82195.2-201ENST00000612348 18351 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SH3D21A4FU49 Y_RNA.116-201ENST00000363292 103 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 RNU6-1138P-201ENST00000365359 106 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SH3D21A4FU49 RNU6-32P-201ENST00000383948 107 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 RNU6-13P-201ENST00000384248 107 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 RNU6-12P-201ENST00000384604 107 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 RNU6-41P-201ENST00000384741 107 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 MIR218-1-201ENST00000384999 110 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 MIR891A-201ENST00000401237 79 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 MIR1263-201ENST00000408324 86 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 MTCO1P44-201ENST00000441935 243 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 AL031737.1-201ENST00000450125 223 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 RNU6-126P-201ENST00000516685 103 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 AC018630.3-201ENST00000542637 96 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 U6.73-201ENST00000619194 103 ntBASIC2.7□□□□□ -1.98
SH3D21A4FU49 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SH3D21A4FU49 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.7□□□□□ -1.98
SH3D21A4FU49 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SH3D21A4FU49 MIR22-201ENST00000362190 85 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 Y_RNA.66-201ENST00000362862 102 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 RNA5SP393-201ENST00000363423 117 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 SNORA54-201ENST00000384281 123 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 MIRLET7F2-201ENST00000385277 83 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 RNU2-32P-201ENST00000411193 191 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.69□□□□□ -1.98
SH3D21A4FU49 SUMO1P4-201ENST00000429430 302 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 AF228730.3-201ENST00000436691 102 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 MTATP6P21-201ENST00000440681 189 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 AL021397.1-201ENST00000451806 248 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 RPL23AP94-201ENST00000512518 302 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 PRELID2P1-201ENST00000552837 301 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 MIR5582-201ENST00000579697 68 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 AL365205.2-201ENST00000594586 68 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 AC007318.2-201ENST00000620999 243 ntBASIC2.69□□□□□ -1.98
SH3D21A4FU49 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.69□□□□□ -1.98
SH3D21A4FU49 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SH3D21A4FU49 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SH3D21A4FU49 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.68□□□□□ -1.98
SH3D21A4FU49 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 RNU6-546P-201ENST00000383991 107 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 SNORA1-201ENST00000384107 130 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 RNU6-1328P-201ENST00000410938 106 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 RNU6-504P-201ENST00000516568 104 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 Y_RNA.694-201ENST00000516677 117 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 RNU6-537P-201ENST00000517277 103 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 IGKV1-22-201ENST00000524313 326 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 MIR4298-201ENST00000584380 73 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 AC010297.1-201ENST00000623948 149 ntBASIC2.68□□□□□ -1.98
SH3D21A4FU49 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SH3D21A4FU49 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
SH3D21A4FU49 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.67□□□□□ -1.98
SH3D21A4FU49 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
SH3D21A4FU49 RNU6-1186P-201ENST00000410429 97 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 HMGN2P34-201ENST00000437647 269 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms