Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.42□□□□□ -1.86
LOC102724428A0A0B4J2F2 AL365205.2-201ENST00000594586 68 ntBASIC3.42□□□□□ -1.86
LOC102724428A0A0B4J2F2 AC107294.3-201ENST00000609211 526 ntBASIC3.42□□□□□ -1.86
LOC102724428A0A0B4J2F2 UCA1.1-201ENST00000620952 75 ntBASIC3.42□□□□□ -1.86
LOC102724428A0A0B4J2F2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 AC093010.3-201ENST00000570269 15214 ntBASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 snoU13.15-201ENST00000459407 104 ntBASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 Y_RNA.694-201ENST00000516677 117 ntBASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 JPX_2.1-201ENST00000614161 69 ntBASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 AC002064.3-201ENST00000623448 346 ntBASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 MTND5P18-201ENST00000445624 1801 ntBASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
LOC102724428A0A0B4J2F2 Y_RNA.66-201ENST00000362862 102 ntBASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 AL513477.1-202ENST00000417061 214 ntBASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 MTCO1P44-201ENST00000441935 243 ntBASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNA5SP490-201ENST00000517141 136 ntBASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 SCARNA11.3-201ENST00000517276 130 ntBASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC007751.1-201ENST00000529260 376 ntBASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR4769-201ENST00000584126 77 ntBASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
LOC102724428A0A0B4J2F2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 Y_RNA.495-201ENST00000384435 112 ntBASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 AF228730.3-201ENST00000436691 102 ntBASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 AL021397.1-201ENST00000451806 248 ntBASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNA5SP320-201ENST00000516263 124 ntBASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-504P-201ENST00000516568 104 ntBASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 U6.73-201ENST00000619194 103 ntBASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
LOC102724428A0A0B4J2F2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR592-201ENST00000384959 97 ntBASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 Z98742.3-201ENST00000418637 326 ntBASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 AL031737.1-201ENST00000450125 223 ntBASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR5582-201ENST00000579697 68 ntBASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR3129-201ENST00000581095 76 ntBASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR4524B-201ENST00000581569 115 ntBASIC3.38□□□□□ -1.87
LOC102724428A0A0B4J2F2 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR450A1-201ENST00000362262 91 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-32P-201ENST00000383948 107 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-546P-201ENST00000383991 107 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-13P-201ENST00000384248 107 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-12P-201ENST00000384604 107 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-41P-201ENST00000384741 107 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR1253-201ENST00000408273 105 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC018634.1-201ENST00000437554 401 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 SNORA4.4-201ENST00000515921 135 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-1096P-201ENST00000517089 102 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 IGKV1-22-201ENST00000524313 326 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 PRELID2P1-201ENST00000552837 301 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 U2.20-201ENST00000613956 192 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC110079.1-202ENST00000635213 138 ntBASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
LOC102724428A0A0B4J2F2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 Y_RNA.116-201ENST00000363292 103 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 SNORA1-201ENST00000384107 130 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR1263-201ENST00000408324 86 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU4-53P-201ENST00000410828 140 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 Y_RNA.621-201ENST00000411065 96 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU2-32P-201ENST00000411193 191 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 RN7SKP192-201ENST00000411291 327 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC009969.1-201ENST00000438726 172 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
LOC102724428A0A0B4J2F2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-743P-201ENST00000364151 106 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR218-1-201ENST00000384999 110 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 MIR520G-201ENST00000385064 90 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC003685.2-201ENST00000422795 395 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 MICF-203ENST00000432679 129 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 RPS29P24-201ENST00000486345 171 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 NDUFA4P2-201ENST00000489989 244 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.35□□□□□ -1.87
LOC102724428A0A0B4J2F2 AC080128.1-201ENST00000474389 1917 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms