Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CAPN6Q9Y6Q1 AL136360.1-201ENST00000503377 1900 ntBASIC2.97□□□□□ -1.93
CAPN6Q9Y6Q1 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CAPN6Q9Y6Q1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.97□□□□□ -1.93
CAPN6Q9Y6Q1 RNU1-23P-201ENST00000363361 144 ntBASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 RNU6-1186P-201ENST00000410429 97 ntBASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 RPS15AP28-201ENST00000435088 386 ntBASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 RN7SL807P-201ENST00000470923 297 ntBASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 AC006483.1-201ENST00000487308 313 ntBASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 SNORA67.7-201ENST00000516664 135 ntBASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 SCARNA13-201ENST00000516672 275 ntBASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CAPN6Q9Y6Q1 MIR449B-201ENST00000384995 97 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 MIR95-201ENST00000385072 81 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 RNU11-5P-201ENST00000391216 129 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 AC060773.1-201ENST00000421698 310 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 AF228730.3-201ENST00000436691 102 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 AC018634.1-201ENST00000437554 401 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 HMGN1P7-201ENST00000491722 313 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 MRPS17P9-201ENST00000511924 393 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 SNORA48.11-201ENST00000517015 89 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 SNORA31.26-201ENST00000517250 137 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 AC025166.1-201ENST00000612411 163 ntBASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CAPN6Q9Y6Q1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 MIR340-201ENST00000362125 95 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 MIR26A1-201ENST00000362205 77 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 RNU1-96P-201ENST00000364163 162 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 RNU6-1164P-201ENST00000364428 107 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 RNU6-880P-201ENST00000384526 107 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 RNVU1-14-201ENST00000384770 164 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 MIRLET7F2-201ENST00000385277 83 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 Y_RNA.649-201ENST00000459077 103 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 SNORA84-201ENST00000459229 133 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 Y_RNA.651-201ENST00000459380 103 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 NDUFA4P2-201ENST00000489989 244 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 MIR3129-201ENST00000581095 76 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 ZNF861P-201ENST00000588126 639 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 AC007229.1-201ENST00000590455 412 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 AC034229.5-201ENST00000624258 185 ntBASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.94□□□□□ -1.94
CAPN6Q9Y6Q1 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 snoU2-30.2-201ENST00000362805 70 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 RNU6-1255P-201ENST00000363434 112 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 SNORA68.1-201ENST00000364537 132 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 Y_RNA.309-201ENST00000365046 111 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 SNORA1-201ENST00000384107 130 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 SNRPGP10-201ENST00000432323 225 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 AC233266.1-201ENST00000454518 96 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 AC011406.1-201ENST00000512440 370 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 RNU7-99P-201ENST00000516271 62 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 AL356280.1-201ENST00000603614 379 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 AC242852.1-201ENST00000612151 96 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 AC244015.1-201ENST00000622301 99 ntBASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CAPN6Q9Y6Q1 AC096644.4-201ENST00000563417 2912 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 RNA5SP374-201ENST00000362939 125 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 Y_RNA.253-201ENST00000364562 112 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 MIR548A1-201ENST00000385041 97 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 RNU2-63P-201ENST00000410792 194 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 AL021397.1-201ENST00000451806 248 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 AC023141.11-201ENST00000508864 202 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 AC096725.1-201ENST00000514266 313 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 SNORA74D-201ENST00000516404 141 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 RNU6-1291P-201ENST00000516591 104 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 AC008555.8-201ENST00000623602 2168 ntBASIC2.92□□□□□ -1.94
CAPN6Q9Y6Q1 RNU6-1292P-201ENST00000383856 107 ntBASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 MIR592-201ENST00000384959 97 ntBASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 SNORA12.1-201ENST00000390873 148 ntBASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 RNA5SP89-201ENST00000410300 108 ntBASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 RNU2-48P-201ENST00000410694 191 ntBASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 RNU6-168P-201ENST00000516189 101 ntBASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 RNU6-1270P-201ENST00000517128 108 ntBASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.91□□□□□ -1.94
CAPN6Q9Y6Q1 MTND5P18-201ENST00000445624 1801 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms