Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 Y_RNA.494-201ENST00000384432 111 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 AL445685.2-201ENST00000422551 342 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 AL157831.1-201ENST00000426134 473 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 AC004223.1-201ENST00000479840 271 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 RN7SL504P-201ENST00000494496 287 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 AC024995.1-201ENST00000523014 93 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 AC140658.3-201ENST00000567603 271 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR6867-201ENST00000610636 67 ntBASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.13□□□□□ -1.75
PCDHGA4Q9Y5G9 AC091152.2-201ENST00000591628 2569 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 SNORA22.1-201ENST00000362701 134 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 SNORA25.6-201ENST00000364121 118 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR515-2-201ENST00000384883 83 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR515-1-201ENST00000384884 83 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 AL356095.1-201ENST00000417217 199 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 RPL31P63-201ENST00000422565 375 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 ABCF2P2-201ENST00000450549 296 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 UBL5P1-201ENST00000507979 193 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 uc_338.25-201ENST00000613756 156 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 XIST_intron.1-201ENST00000619444 68 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 AC006111.3-201ENST00000622137 383 ntBASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PCDHGA4Q9Y5G9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 SNORA70.4-201ENST00000365509 134 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 SNORD66.1-201ENST00000391230 76 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 UBL5P3-201ENST00000475112 231 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 RN7SL691P-201ENST00000494487 301 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 SCARNA17.1-201ENST00000516211 143 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 SCARNA17.2-201ENST00000516334 143 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 IGLV3-17-201ENST00000519099 244 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 AC006064.5-201ENST00000541782 248 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 SCARNA17.4-201ENST00000614296 143 ntBASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
PCDHGA4Q9Y5G9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 RNU6-1244P-201ENST00000363614 108 ntBASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 RN7SL600P-201ENST00000581811 299 ntBASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR6875-201ENST00000617506 72 ntBASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR6075-201ENST00000620782 95 ntBASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 MIR6841-201ENST00000637129 72 ntBASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
PCDHGA4Q9Y5G9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 RNU1-14P-201ENST00000362759 152 ntBASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 RNU6-424P-201ENST00000384367 105 ntBASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 AL031183.1-201ENST00000457667 207 ntBASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 AL163195.1-201ENST00000496941 348 ntBASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 RNA5SP49-201ENST00000516450 115 ntBASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 RNU7-28P-201ENST00000516759 62 ntBASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 SEPT14P17-201ENST00000617978 177 ntBASIC4.09□□□□□ -1.75
PCDHGA4Q9Y5G9 MFSD8-233ENST00000641482 4860 ntBASIC4.09□□□□□ -1.76
PCDHGA4Q9Y5G9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
PCDHGA4Q9Y5G9 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA4Q9Y5G9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.09□□□□□ -1.76
PCDHGA4Q9Y5G9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU1-15P-201ENST00000353977 144 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU2-63P-201ENST00000410792 194 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 Z98742.3-201ENST00000418637 326 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 AC083863.1-201ENST00000438811 231 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU7-2P-201ENST00000516096 62 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 RNA5SP519-201ENST00000516480 119 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 AP001486.2-201ENST00000561652 5113 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 AC103810.6-201ENST00000606708 136 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA4Q9Y5G9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms