Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNORA27.1-201ENST00000362604 124 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 Y_RNA.172-201ENST00000363765 102 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-704P-201ENST00000364162 103 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 snoU2_19.4-201ENST00000364329 80 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-407P-201ENST00000365280 104 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-1130P-201ENST00000365434 107 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-449P-201ENST00000383914 107 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-546P-201ENST00000383991 107 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-418P-201ENST00000384035 107 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 Y_RNA.580-201ENST00000391004 95 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 SNORD23.1-201ENST00000408212 104 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AL606753.1-201ENST00000427435 87 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 CYP2C59P-201ENST00000457790 269 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AC016925.1-201ENST00000458303 298 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 SNORD65B-201ENST00000459126 73 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AC005840.1-201ENST00000498412 377 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 SNORA31.11-201ENST00000516528 139 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AP001485.1-201ENST00000604799 199 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AC103810.6-201ENST00000606708 136 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AC068647.2-201ENST00000637380 353 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 RNU4-84P-201ENST00000364200 139 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-969P-201ENST00000383900 105 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 Y_RNA.572-201ENST00000384757 98 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 MIR526A2-201ENST00000390198 65 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-578P-201ENST00000390980 103 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 RNU2-32P-201ENST00000411193 191 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 EBAG9P1-201ENST00000418955 543 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 HMGN2P18-201ENST00000450680 270 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 HSPE1P13-201ENST00000451143 297 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 RPS26P55-201ENST00000471178 356 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 AC117454.1-201ENST00000491120 168 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 CYCSP26-201ENST00000534107 320 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 MIR1248-201ENST00000629190 106 ntBASIC2.73□□□□□ -1.97
CTDP1Q9Y5B0 AC009487.4-201ENST00000624969 3585 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 MIR6073-201ENST00000352083 89 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 MIR367-201ENST00000362299 68 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-743P-201ENST00000364151 106 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 U8.7-201ENST00000364940 136 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 SNORD50.2-201ENST00000365465 70 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-144P-201ENST00000383951 107 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-1235P-201ENST00000384559 107 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 AL161788.1-201ENST00000441805 169 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-498P-201ENST00000459468 107 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 RNU1-41P-201ENST00000516161 162 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 RNU1-48P-201ENST00000516400 162 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-1007P-201ENST00000516586 107 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 RNA5SP490-201ENST00000517141 136 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 AC022616.8-201ENST00000533569 253 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 MIR4724-201ENST00000579485 89 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 MIR6840-201ENST00000611937 71 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 MIR548AY-201ENST00000617669 107 ntBASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CTDP1Q9Y5B0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CTDP1Q9Y5B0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.71□□□□□ -1.97
CTDP1Q9Y5B0 SNORD116-13-201ENST00000384408 92 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 RNU1-148P-201ENST00000384472 162 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 MIR144-201ENST00000384886 86 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 AC008134.1-201ENST00000420943 193 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 AC245047.8-201ENST00000456455 284 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 AC010409.1-201ENST00000487382 476 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 RPS29P21-201ENST00000496272 170 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 RNA5SP20-201ENST00000515976 84 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 RNU7-115P-201ENST00000516433 55 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 AC025647.1-201ENST00000517879 253 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 MIR4648-201ENST00000580107 72 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 MIR5688-201ENST00000580619 83 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CTDP1Q9Y5B0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 AL356292.1-201ENST00000283110 373 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 MIR616-201ENST00000385293 97 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 RNU6-239P-201ENST00000390990 99 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 RN7SKP223-201ENST00000410582 62 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 snoU13.26-201ENST00000459452 105 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 RNU2-34P-201ENST00000516534 121 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 RNU6-453P-201ENST00000516819 85 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 RNA5SP402-201ENST00000517148 110 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 MIR4431-201ENST00000579990 94 ntBASIC2.7□□□□□ -1.98
CTDP1Q9Y5B0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 Y_RNA.343-201ENST00000365354 112 ntBASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 Y_RNA.400-201ENST00000383963 111 ntBASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 SNORA36B-201ENST00000410438 131 ntBASIC2.69□□□□□ -1.98
CTDP1Q9Y5B0 RNA5SP270-201ENST00000411361 118 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms