Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.72□□□□□ -2.13
YIPF1Q9Y548 MTND2P23-201ENST00000422990 651 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 SUMO1P2-201ENST00000452524 304 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 AC097462.1-201ENST00000514125 324 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 Y_RNA.676-201ENST00000516393 96 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 RNU6-63P-201ENST00000516690 95 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 RNU7-172P-201ENST00000517125 64 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.72□□□□□ -2.13
YIPF1Q9Y548 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.72□□□□□ -2.13
YIPF1Q9Y548 AC024995.1-201ENST00000523014 93 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.72□□□□□ -2.13
YIPF1Q9Y548 SNORD113-5-201ENST00000607261 78 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 AC127459.3-201ENST00000624328 466 ntBASIC1.72□□□□□ -2.13
YIPF1Q9Y548 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
YIPF1Q9Y548 Y_RNA.512-201ENST00000384518 102 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 RNU6-136P-201ENST00000384663 107 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 RNA5SP109-201ENST00000391010 116 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 RNU6-1109P-201ENST00000391187 107 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 AC244636.1-201ENST00000421152 228 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 DYNLT3P2-201ENST00000442517 295 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 RPS26P55-201ENST00000471178 356 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 RN7SL274P-201ENST00000492268 272 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 RNU6-1053P-201ENST00000515930 101 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 SNORA31.17-201ENST00000516953 127 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 MIR3145-201ENST00000580727 82 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 DEFB117-201ENST00000602356 141 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.71□□□□□ -2.14
YIPF1Q9Y548 AC073413.2-201ENST00000604332 360 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.71□□□□□ -2.14
YIPF1Q9Y548 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
YIPF1Q9Y548 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
YIPF1Q9Y548 Y_RNA.4-201ENST00000362333 112 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 SNORD114-7-201ENST00000362520 77 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 snoU2_19.2-201ENST00000363024 80 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 RNU6-238P-201ENST00000363313 106 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 Y_RNA.172-201ENST00000363765 102 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.7□□□□□ -2.14
YIPF1Q9Y548 Y_RNA.383-201ENST00000383855 97 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 MIR520A-201ENST00000384862 85 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 RNU2-7P-201ENST00000410794 178 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 RNU2-61P-201ENST00000411069 191 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 AL731563.1-201ENST00000442202 214 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 AL606517.2-201ENST00000442855 241 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 AL118496.2-201ENST00000448300 230 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 HSPE1P25-201ENST00000455484 251 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 MTND5P22-201ENST00000458380 195 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 AC025465.3-201ENST00000510570 311 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 SNORA70.12-201ENST00000516084 153 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 RNU6-496P-201ENST00000516145 99 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 RNU6-1337P-201ENST00000516525 95 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 RNU6-635P-201ENST00000516651 102 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 RNA5SP437-201ENST00000517249 129 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 AP003733.2-201ENST00000529409 171 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 AC008269.2-201ENST00000561915 1105 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 AC136443.5-201ENST00000603741 370 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 AC010900.2-201ENST00000604508 210 ntBASIC1.7□□□□□ -2.14
YIPF1Q9Y548 SNORA63D-201ENST00000364359 132 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 RNU6-117P-201ENST00000365415 107 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
YIPF1Q9Y548 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 AC009310.1-201ENST00000414414 451 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 AP1B1P2-201ENST00000416196 106 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 RPS26P45-201ENST00000471748 340 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.69□□□□□ -2.14
YIPF1Q9Y548 RNU6-1143P-201ENST00000516125 104 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.69□□□□□ -2.14
YIPF1Q9Y548 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 SNORD53B-201ENST00000577887 78 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 AC022217.4-201ENST00000604389 163 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 AL645939.4-201ENST00000604495 135 ntBASIC1.69□□□□□ -2.14
YIPF1Q9Y548 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.68□□□□□ -2.14
YIPF1Q9Y548 SNORA4.2-201ENST00000365313 147 ntBASIC1.68□□□□□ -2.14
YIPF1Q9Y548 Y_RNA.581-201ENST00000391017 97 ntBASIC1.68□□□□□ -2.14
YIPF1Q9Y548 RNA5SP511-201ENST00000410487 115 ntBASIC1.68□□□□□ -2.14
YIPF1Q9Y548 POLR2KP2-201ENST00000438155 177 ntBASIC1.68□□□□□ -2.14
YIPF1Q9Y548 RPS27P1-201ENST00000450552 247 ntBASIC1.68□□□□□ -2.14
YIPF1Q9Y548 RPL21P9-201ENST00000556149 474 ntBASIC1.68□□□□□ -2.14
YIPF1Q9Y548 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
YIPF1Q9Y548 BX248123.2-201ENST00000606318 124 ntBASIC1.68□□□□□ -2.14
YIPF1Q9Y548 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.68□□□□□ -2.14
YIPF1Q9Y548 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
YIPF1Q9Y548 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.67□□□□□ -2.14
YIPF1Q9Y548 RNU4-90P-201ENST00000362773 141 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 SNORD116-13-201ENST00000384408 92 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 Y_RNA.541-201ENST00000384640 113 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 RNU6-376P-201ENST00000384731 106 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 MIR548F4-201ENST00000408515 105 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 HSPE1P9-201ENST00000440046 311 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 RNU7-95P-201ENST00000459222 64 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.67□□□□□ -2.14
YIPF1Q9Y548 RNU6-1045P-201ENST00000516321 107 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.67□□□□□ -2.14
YIPF1Q9Y548 AL117187.1-201ENST00000555482 181 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 AC022254.1-201ENST00000567857 235 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 AC012493.3-201ENST00000604494 112 ntBASIC1.67□□□□□ -2.14
YIPF1Q9Y548 MIR6079-201ENST00000635807 62 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms