Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 RPS29P21-201ENST00000496272 170 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 RNU4-57P-201ENST00000515980 135 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 RNU1-143P-201ENST00000516296 146 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 RNU6-1234P-201ENST00000516877 103 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 AL359881.1-201ENST00000602916 267 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 U1.23-201ENST00000610293 146 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 RNU1-68P-201ENST00000615382 146 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 U1.39-201ENST00000621562 146 ntBASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SIT1Q9Y3P8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AL355596.1-201ENST00000565399 3996 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 SNORA25.7-201ENST00000364375 127 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 RNU6-215P-201ENST00000365169 102 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 RNU6-1138P-201ENST00000365359 106 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 MIR562-201ENST00000384894 95 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 MIR520G-201ENST00000385064 90 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 RNU11-5P-201ENST00000391216 129 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AC060773.1-201ENST00000421698 310 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AL353689.1-201ENST00000438895 199 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 RNU6-659P-201ENST00000516454 104 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AC011604.1-201ENST00000545978 196 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AL031274.2-201ENST00000599419 203 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AL049861.1-201ENST00000603130 150 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 AC011603.4-201ENST00000611325 277 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 SNORA50A-202ENST00000629536 136 ntBASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.76□□□□□ -1.97
SIT1Q9Y3P8 RNY1P11-201ENST00000363759 113 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 RNU6-136P-201ENST00000384663 107 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 RNU6-220P-201ENST00000390919 107 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 SNORA26-201ENST00000391286 122 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 MIR1253-201ENST00000408273 105 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 Z98742.3-201ENST00000418637 326 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 snoU13.23-201ENST00000458863 104 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 AC010401.1-201ENST00000463867 348 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 AC018868.1-201ENST00000491307 315 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 RNU6-991P-201ENST00000516168 107 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 RPL23AP91-201ENST00000569211 455 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 MIR4662B-201ENST00000579498 81 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 AL353149.1-201ENST00000610667 244 ntBASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SIT1Q9Y3P8 AC092435.3-201ENST00000565538 3654 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 RNU6-1209P-201ENST00000363655 107 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 MIR512-1-201ENST00000384913 84 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 Y_RNA.584-201ENST00000391090 114 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 RNA5SP425-201ENST00000410336 112 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 AC006539.3-201ENST00000454258 129 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 RN7SKP179-201ENST00000516126 217 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 RNU7-99P-201ENST00000516271 62 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 AC090142.3-201ENST00000519012 385 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 ZNF861P-201ENST00000588126 639 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 AL355297.2-201ENST00000604792 129 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
SIT1Q9Y3P8 snoU2-30.2-201ENST00000362805 70 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 RNU6-743P-201ENST00000364151 106 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 Y_RNA.634-201ENST00000364811 113 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 RNU6-915P-201ENST00000364943 103 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 SNORD21-201ENST00000383953 95 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 RNU6-1080P-201ENST00000383982 107 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 SNORD20-201ENST00000384550 80 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 SRIP3-201ENST00000413200 219 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 HMGN2P34-201ENST00000437647 269 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 RNU2-56P-201ENST00000516826 190 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 AC104027.1-201ENST00000521887 300 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 IGKV3-31-201ENST00000523109 329 ntBASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.73□□□□□ -1.97
SIT1Q9Y3P8 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 Y_RNA.120-201ENST00000363304 110 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 RNU4-53P-201ENST00000410828 140 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 RPL39P40-201ENST00000445481 146 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 RNU1-131P-201ENST00000458943 161 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 AC011406.1-201ENST00000512440 370 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 Y_RNA.686-201ENST00000516548 134 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 Y_RNA.712-201ENST00000517011 92 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 RNU7-128P-201ENST00000517247 62 ntBASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.72□□□□□ -1.97
SIT1Q9Y3P8 AC015712.3-201ENST00000559380 164 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 159.4 ms