Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 Y_RNA.666-201ENST00000516187 112 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 RNU6-1231P-201ENST00000517185 103 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 AL358944.1-201ENST00000528537 144 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
NOD1Q9Y239 uc_338.25-201ENST00000613756 156 ntBASIC3.51□□□□□ -1.85
NOD1Q9Y239 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NOD1Q9Y239 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NOD1Q9Y239 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NOD1Q9Y239 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NOD1Q9Y239 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
NOD1Q9Y239 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
NOD1Q9Y239 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
NOD1Q9Y239 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NOD1Q9Y239 RNU6-888P-201ENST00000363010 101 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 Y_RNA.99-201ENST00000363138 105 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 SNORA33-201ENST00000363664 130 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 Y_RNA.346-201ENST00000365385 112 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 RNU6-1292P-201ENST00000383856 107 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 SNORD24-201ENST00000383884 75 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 SNORD15B-201ENST00000384714 146 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
NOD1Q9Y239 AL031121.1-201ENST00000406553 254 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 CST9LP2-201ENST00000437612 320 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 SCGB1D5P-201ENST00000515134 247 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 Y_RNA.714-201ENST00000517065 90 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 AC022217.4-201ENST00000604389 163 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 AC004832.5-201ENST00000608677 401 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 AC025166.1-201ENST00000612411 163 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 AL591926.4-201ENST00000616895 298 ntBASIC3.5□□□□□ -1.85
NOD1Q9Y239 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.5□□□□□ -1.85
NOD1Q9Y239 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NOD1Q9Y239 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NOD1Q9Y239 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NOD1Q9Y239 Y_RNA.35-201ENST00000362601 101 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 RNU6-461P-201ENST00000364195 107 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 SNORA48.8-201ENST00000391324 134 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 ATP5J2P3-201ENST00000451550 258 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 AL021397.1-201ENST00000451806 248 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.49□□□□□ -1.85
NOD1Q9Y239 AC091826.1-201ENST00000514065 313 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 RNU6-693P-201ENST00000516134 107 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 MIR4738-201ENST00000579134 87 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 AC244205.2-202ENST00000635781 342 ntBASIC3.49□□□□□ -1.85
NOD1Q9Y239 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NOD1Q9Y239 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NOD1Q9Y239 RNU6-1164P-201ENST00000364428 107 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 Y_RNA.242-201ENST00000364473 110 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 SNORA8-201ENST00000384574 139 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 MIRLET7F2-201ENST00000385277 83 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.48□□□□□ -1.85
NOD1Q9Y239 AL049830.1-201ENST00000468034 425 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 AC006483.1-201ENST00000487308 313 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.48□□□□□ -1.85
NOD1Q9Y239 MIR3613-201ENST00000579844 87 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 MIR3616-201ENST00000584070 92 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 AC087685.1-201ENST00000587507 141 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 AC006023.1-201ENST00000603944 259 ntBASIC3.48□□□□□ -1.85
NOD1Q9Y239 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.48□□□□□ -1.85
NOD1Q9Y239 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NOD1Q9Y239 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NOD1Q9Y239 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
NOD1Q9Y239 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NOD1Q9Y239 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NOD1Q9Y239 AC245060.5-201ENST00000610778 3293 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 MIR423-201ENST00000362201 94 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 SNORA1B-201ENST00000362535 133 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 RNU6-160P-201ENST00000384591 107 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 RNU6-1072P-201ENST00000384703 107 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 RNU6-443P-201ENST00000384780 107 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 AL117342.1-201ENST00000404861 406 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 RNA5SP229-201ENST00000410809 99 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 SNRPGP13-201ENST00000442212 177 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 RNU1-131P-201ENST00000458943 161 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 RN7SL330P-201ENST00000469709 307 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 RN7SL636P-201ENST00000497504 294 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 RNA5SP236-201ENST00000516169 116 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 AP002004.2-201ENST00000531656 154 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 MIR622-201ENST00000638396 96 ntBASIC3.47□□□□□ -1.85
NOD1Q9Y239 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.47□□□□□ -1.85
NOD1Q9Y239 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
NOD1Q9Y239 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NOD1Q9Y239 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.46□□□□□ -1.85
NOD1Q9Y239 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.46□□□□□ -1.86
NOD1Q9Y239 MIR548A1-201ENST00000385041 97 ntBASIC3.46□□□□□ -1.86
NOD1Q9Y239 AC002075.2-201ENST00000425207 252 ntBASIC3.46□□□□□ -1.86
NOD1Q9Y239 Y_RNA.649-201ENST00000459077 103 ntBASIC3.46□□□□□ -1.86
NOD1Q9Y239 RNU7-94P-201ENST00000459576 63 ntBASIC3.46□□□□□ -1.86
NOD1Q9Y239 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.46□□□□□ -1.86
NOD1Q9Y239 MIR4679-2-201ENST00000578358 77 ntBASIC3.46□□□□□ -1.86
NOD1Q9Y239 RPL12P50-201ENST00000603116 116 ntBASIC3.46□□□□□ -1.86
NOD1Q9Y239 AL033523.1-201ENST00000605153 153 ntBASIC3.46□□□□□ -1.86
NOD1Q9Y239 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
NOD1Q9Y239 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NOD1Q9Y239 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.45□□□□□ -1.86
NOD1Q9Y239 MTND5P18-201ENST00000445624 1801 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 MIR22-201ENST00000362190 85 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 RNU6-147P-201ENST00000383983 107 ntBASIC3.45□□□□□ -1.86
NOD1Q9Y239 MIR515-2-201ENST00000384883 83 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms