Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 AL353689.1-201ENST00000438895 199 ntBASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 RPS26P48-201ENST00000491713 339 ntBASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 SEM1P1-201ENST00000506694 209 ntBASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 RN7SKP18-201ENST00000516005 275 ntBASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 ZNF271P-202ENST00000465539 1970 ntBASIC3.19□□□□□ -1.9
TRIM33Q9UPN9 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 SNORA51.5-201ENST00000384126 131 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 MIR200C-201ENST00000384980 68 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 MIR181B1-201ENST00000385240 110 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 PTMAP2-201ENST00000397627 327 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 CYCSP4-201ENST00000429682 331 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 CKS1BP2-201ENST00000497342 240 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 MIR4506-201ENST00000584693 77 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 AL353149.1-201ENST00000610667 244 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 AL591926.4-201ENST00000616895 298 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 AL161912.2-201ENST00000565707 3007 ntBASIC3.18□□□□□ -1.9
TRIM33Q9UPN9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 MIR126-201ENST00000362291 85 ntBASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 Y_RNA.198-201ENST00000364013 98 ntBASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 SNORA68.1-201ENST00000364537 132 ntBASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 RNU6-1014P-201ENST00000383940 103 ntBASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 Y_RNA.410-201ENST00000383992 113 ntBASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 FTH1P12-201ENST00000432137 551 ntBASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 AL121772.2-201ENST00000614331 297 ntBASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 AL035470.1-201ENST00000622571 220 ntBASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM33Q9UPN9 AL589743.1-201ENST00000551932 2712 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 RNA5SP124-201ENST00000362739 110 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 U8.6-201ENST00000364939 135 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 RNU6-1113P-201ENST00000384348 107 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 MIR670-201ENST00000390142 98 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 AL117342.1-201ENST00000404861 406 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 RNA5SP229-201ENST00000410809 99 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 HMGN2P32-201ENST00000444648 269 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 CYCSP35-201ENST00000451978 304 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 RN7SL601P-201ENST00000471221 293 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 RNA5SP281-201ENST00000516504 135 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 AC091544.4-201ENST00000555268 342 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 MIR3158-1-201ENST00000583596 81 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 U3.45-201ENST00000607547 219 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 MIR92B-201ENST00000607575 96 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 MIR338-201ENST00000636369 67 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 MIR376A2-201ENST00000636782 80 ntBASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
TRIM33Q9UPN9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM33Q9UPN9 RNY4P6-201ENST00000363667 96 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 RNA5SP387-201ENST00000364226 106 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 Y_RNA.267-201ENST00000364679 109 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 MIR522-201ENST00000385071 87 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 RPL39P34-201ENST00000477141 156 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 RNU6-240P-201ENST00000516098 97 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 MIR4429-201ENST00000580105 73 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 AC134878.1-201ENST00000619901 243 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 U6.108-201ENST00000637764 58 ntBASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM33Q9UPN9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 SNORD73B-201ENST00000364394 72 ntBASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 RNA5SP467-201ENST00000391274 118 ntBASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 AL133547.1-201ENST00000448546 220 ntBASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 AP004217.1-201ENST00000480579 346 ntBASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 SNORA67.7-201ENST00000516664 135 ntBASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 RNU1-142P-201ENST00000516682 145 ntBASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 AP002004.2-201ENST00000531656 154 ntBASIC3.14□□□□□ -1.91
TRIM33Q9UPN9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 SNORA63.5-201ENST00000363548 123 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 Y_RNA.213-201ENST00000364178 111 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 RNU6-294P-201ENST00000364999 102 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 Y_RNA.544-201ENST00000384650 113 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 AL590004.2-201ENST00000404787 371 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 RNU2-63P-201ENST00000410792 194 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 EDDM3CP-201ENST00000415977 425 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 RNU7-94P-201ENST00000459576 63 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 RN7SKP43-201ENST00000516173 320 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 RNU6-1041P-201ENST00000516254 102 ntBASIC3.13□□□□□ -1.91
TRIM33Q9UPN9 SNORA40.13-201ENST00000516379 120 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 238 ms