Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CDC42EP3Q9UKI2 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.55□□□□□ -2
CDC42EP3Q9UKI2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.55□□□□□ -2
CDC42EP3Q9UKI2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 RNU1-70P-201ENST00000362618 164 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 RNU6-1209P-201ENST00000363655 107 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 Y_RNA.420-201ENST00000384043 110 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 SNORA54-201ENST00000384281 123 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 Y_RNA.521-201ENST00000384560 114 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 RNU6-851P-201ENST00000384565 107 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 SNORA46-201ENST00000384762 135 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 SNORD37.2-201ENST00000391075 66 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 SNORA75.5-201ENST00000391291 81 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 AL117342.1-201ENST00000404861 406 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 AC105272.1-201ENST00000438604 198 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 YWHAEP4-201ENST00000505390 198 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 RNU6-56P-201ENST00000516986 93 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 RPL23AP91-201ENST00000569211 455 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 AP001340.1-201ENST00000624405 217 ntBASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CDC42EP3Q9UKI2 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 MIR22-201ENST00000362190 85 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 Y_RNA.432-201ENST00000384087 111 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 Y_RNA.542-201ENST00000384641 111 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 RNU11-5P-201ENST00000391216 129 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 MIR1262-201ENST00000408276 93 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 SNORA79-201ENST00000408376 140 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 EDDM3CP-201ENST00000415977 425 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 Z96811.1-201ENST00000445880 108 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 RNU6-1299P-201ENST00000516316 100 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 RNU6-1096P-201ENST00000517089 102 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 AC120024.3-201ENST00000603167 156 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 AC073413.2-201ENST00000604332 360 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 AL365222.1-201ENST00000614661 98 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 Z82195.2-201ENST00000612348 18351 ntBASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CDC42EP3Q9UKI2 RNY1P11-201ENST00000363759 113 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1138P-201ENST00000365359 106 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 AC009238.1-201ENST00000442165 424 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 AC009237.6-201ENST00000446969 424 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1041P-201ENST00000516254 102 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-313P-201ENST00000516317 112 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 MIR4319-201ENST00000577285 85 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 AL031274.2-201ENST00000599419 203 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 AL359075.3-201ENST00000613288 217 ntBASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDC42EP3Q9UKI2 AC018630.2-201ENST00000534866 2403 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1082P-201ENST00000364574 107 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 MIR539-201ENST00000365690 78 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 SNORA22C-201ENST00000384614 134 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 SNORA20-201ENST00000384662 132 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1154P-201ENST00000391001 104 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 RNA5SP467-201ENST00000391274 118 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-588P-201ENST00000410281 105 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1186P-201ENST00000410429 97 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 RNA5SP229-201ENST00000410809 99 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 AL139132.1-201ENST00000431587 344 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 RPS15AP28-201ENST00000435088 386 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 AC008267.6-201ENST00000441664 139 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 UBL5P3-201ENST00000475112 231 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-237P-201ENST00000515985 71 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 AL358944.1-201ENST00000528537 144 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 TUG1_4.1-201ENST00000619464 181 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 AL355596.1-201ENST00000565399 3996 ntBASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CDC42EP3Q9UKI2 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 Y_RNA.218-201ENST00000364218 104 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-160P-201ENST00000384591 107 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-443P-201ENST00000384780 107 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 SNORD88.1-201ENST00000408684 91 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 AC092427.1-202ENST00000430569 476 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 AC245047.4-201ENST00000433189 144 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 AC018634.1-201ENST00000437554 401 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 AL135938.1-201ENST00000443141 297 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 AC023449.1-201ENST00000454464 154 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 RPS26P45-201ENST00000471748 340 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-126P-201ENST00000516685 103 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-971P-201ENST00000516920 106 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-341P-201ENST00000516973 96 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 MIR6079-201ENST00000635807 62 ntBASIC2.5□□□□□ -2.01
CDC42EP3Q9UKI2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms