Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 AC100821.1-201ENST00000523153 2479 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.19-201ENST00000362462 99 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 SNORD81.1-201ENST00000363064 77 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 RNU6-770P-201ENST00000363929 105 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 RNU4-13P-201ENST00000364019 141 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.286-201ENST00000364813 102 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.361-201ENST00000365515 120 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 RNU6-440P-201ENST00000390882 105 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 RNA5SP511-201ENST00000410487 115 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 RNU2-61P-201ENST00000411069 191 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 ELOCP20-201ENST00000422460 345 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 AC024067.1-201ENST00000426199 223 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 FTH1P12-201ENST00000432137 551 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 MIR8054-201ENST00000620877 86 ntBASIC1.8□□□□□ -2.12
HCN3Q9P1Z3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.153-201ENST00000363615 91 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.214-201ENST00000364201 112 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 RNU6-117P-201ENST00000365415 107 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.383-201ENST00000383855 97 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 SNORD116-13-201ENST00000384408 92 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 SNORD115-46-201ENST00000390982 71 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 MIR1267-201ENST00000408723 78 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 RNU6-855P-201ENST00000410395 104 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 RNU6-710P-201ENST00000410424 105 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 RN7SKP200-201ENST00000410564 320 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 HSPE1P13-201ENST00000451143 297 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 AC010655.3-201ENST00000478818 450 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 MRPS35P2-201ENST00000508242 191 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 RNU6-1291P-201ENST00000516591 104 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 RNU2-56P-201ENST00000516826 190 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 SNORA44.1-201ENST00000517031 108 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 AC012493.3-201ENST00000604494 112 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 MIR7111-201ENST00000619751 72 ntBASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.79□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.105-201ENST00000363182 111 ntBASIC1.78□□□□□ -2.12
HCN3Q9P1Z3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.78□□□□□ -2.12
HCN3Q9P1Z3 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
HCN3Q9P1Z3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.78□□□□□ -2.12
HCN3Q9P1Z3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.78□□□□□ -2.12
HCN3Q9P1Z3 SNORA31.10-201ENST00000516482 106 ntBASIC1.78□□□□□ -2.12
HCN3Q9P1Z3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.78□□□□□ -2.12
HCN3Q9P1Z3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.172-201ENST00000363765 102 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 RNU6-806P-201ENST00000365147 105 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 RNU6-102P-201ENST00000384485 104 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 MIR606-201ENST00000384851 96 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 MIR520G-201ENST00000385064 90 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 MIR30A-201ENST00000385092 71 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 RNU6-121P-201ENST00000410525 99 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.621-201ENST00000411065 96 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 STAG3L5P-204ENST00000443759 179 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 LINC01399-202ENST00000458450 244 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 AC098869.1-201ENST00000481627 292 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 RNU6-341P-201ENST00000516973 96 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.64-201ENST00000362845 102 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.341-201ENST00000365341 102 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 MIR562-201ENST00000384894 95 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 AL162725.1-201ENST00000435405 301 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 JTBP1-201ENST00000441314 247 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 RNU6-295P-201ENST00000516901 104 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 AC015720.1-201ENST00000565251 277 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 AC091178.2-201ENST00000584401 117 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 AP000942.3-201ENST00000603702 160 ntBASIC1.76□□□□□ -2.13
HCN3Q9P1Z3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 MIR424-201ENST00000362227 98 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.26-201ENST00000362539 101 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 RNU4-90P-201ENST00000362773 141 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 RNU6-203P-201ENST00000384038 104 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 RNU6-1160P-201ENST00000384546 104 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 AL034345.1-201ENST00000407768 123 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 RPL21P38-201ENST00000418090 167 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 AC005908.1-201ENST00000468701 347 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 RNU6-1143P-201ENST00000516125 104 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 RNU6-496P-201ENST00000516145 99 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 AC095038.3-201ENST00000634439 195 ntBASIC1.75□□□□□ -2.13
HCN3Q9P1Z3 SNORA1B-201ENST00000362535 133 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 RNU4-80P-201ENST00000363200 141 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.276-201ENST00000364732 109 ntBASIC1.74□□□□□ -2.13
HCN3Q9P1Z3 Y_RNA.569-201ENST00000384749 103 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 167.1 ms