Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6-905P-201ENST00000384434 107 ntBASIC3.45□□□□□ -1.86
ATG3Q9NT62 RNU6-19P-201ENST00000384718 107 ntBASIC3.45□□□□□ -1.86
ATG3Q9NT62 MIR873-201ENST00000401120 77 ntBASIC3.45□□□□□ -1.86
ATG3Q9NT62 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG3Q9NT62 RNU6-437P-201ENST00000459408 95 ntBASIC3.45□□□□□ -1.86
ATG3Q9NT62 SRIP1-201ENST00000489235 288 ntBASIC3.45□□□□□ -1.86
ATG3Q9NT62 RPL23AP54-201ENST00000495129 419 ntBASIC3.45□□□□□ -1.86
ATG3Q9NT62 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.45□□□□□ -1.86
ATG3Q9NT62 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.45□□□□□ -1.86
ATG3Q9NT62 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
ATG3Q9NT62 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG3Q9NT62 AL356292.1-201ENST00000283110 373 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ATG3Q9NT62 snoU2_19.1-201ENST00000362361 80 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 SNORD114-7-201ENST00000362520 77 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 SNORA72-201ENST00000384339 132 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.44□□□□□ -1.86
ATG3Q9NT62 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.44□□□□□ -1.86
ATG3Q9NT62 AC107626.1-201ENST00000471084 183 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 SEM1P1-201ENST00000506694 209 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 RNA5SP282-201ENST00000516355 108 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 RNU6-63P-201ENST00000516690 95 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 IGKV1-22-201ENST00000524313 326 ntBASIC3.44□□□□□ -1.86
ATG3Q9NT62 RNA5SP289-201ENST00000362332 137 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 Y_RNA.91-201ENST00000363042 107 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 SNORD114-19-201ENST00000363072 75 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 RNU6-674P-201ENST00000363831 107 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 RNU6-647P-201ENST00000364243 107 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 RNU4-41P-201ENST00000364426 143 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 Y_RNA.388-201ENST00000383919 113 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 RNA5SP496-201ENST00000391240 109 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 RNU6-554P-201ENST00000410466 106 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 SCARNA17.1-201ENST00000516211 143 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 SCARNA17.2-201ENST00000516334 143 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 SCARNA17.4-201ENST00000614296 143 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 AC106754.2-201ENST00000623006 233 ntBASIC3.43□□□□□ -1.86
ATG3Q9NT62 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
ATG3Q9NT62 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG3Q9NT62 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG3Q9NT62 MTND5P18-201ENST00000445624 1801 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 SNORA27.1-201ENST00000362604 124 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 RNU6-640P-201ENST00000363693 105 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 U8.6-201ENST00000364939 135 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 Y_RNA.348-201ENST00000365403 103 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 RNU6-748P-201ENST00000384648 107 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 MIR586-201ENST00000385035 97 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 RNU2-55P-201ENST00000411146 174 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG3Q9NT62 HMGN2P9-201ENST00000476875 229 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 AP004217.1-201ENST00000480579 346 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 RNU6-1299P-201ENST00000516316 100 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 AL160236.1-201ENST00000556317 195 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 MIR3605-201ENST00000583214 100 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 AC005972.2-201ENST00000604690 348 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 RNU6-91P-201ENST00000607774 107 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 AC025166.1-201ENST00000612411 163 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.42□□□□□ -1.86
ATG3Q9NT62 ZNF658B-202ENST00000615961 3375 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 MAPK10-266ENST00000641066 6555 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 RNU6-136P-201ENST00000384663 107 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 MIR181A2-201ENST00000384863 110 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 RPL39P40-201ENST00000445481 146 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 RPS26P55-201ENST00000471178 356 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 RNA5SP320-201ENST00000516263 124 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 RNU6-1098P-201ENST00000516772 96 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 CTSLP2-204ENST00000629029 392 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 AC069528.2-201ENST00000624849 1991 ntBASIC3.41□□□□□ -1.86
ATG3Q9NT62 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG3Q9NT62 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATG3Q9NT62 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATG3Q9NT62 SNORA68.1-201ENST00000364537 132 ntBASIC3.4□□□□□ -1.87
ATG3Q9NT62 RNU6-1080P-201ENST00000383982 107 ntBASIC3.4□□□□□ -1.87
ATG3Q9NT62 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG3Q9NT62 RPL36AP21-201ENST00000490372 323 ntBASIC3.4□□□□□ -1.87
ATG3Q9NT62 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.4□□□□□ -1.87
ATG3Q9NT62 SNORA31.26-201ENST00000517250 137 ntBASIC3.4□□□□□ -1.87
ATG3Q9NT62 SCARNA11.3-201ENST00000517276 130 ntBASIC3.4□□□□□ -1.87
ATG3Q9NT62 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.4□□□□□ -1.87
ATG3Q9NT62 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATG3Q9NT62 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATG3Q9NT62 RNU6-1210P-201ENST00000363775 107 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 Y_RNA.634-201ENST00000364811 113 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 Y_RNA.346-201ENST00000365385 112 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 SNORD14D-201ENST00000384390 87 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 RNA5SP511-201ENST00000410487 115 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 RNY4P29-201ENST00000410801 97 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 SNORD65B-201ENST00000459126 73 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 RNU7-116P-201ENST00000516940 62 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 AC027419.1-201ENST00000522976 328 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.39□□□□□ -1.87
ATG3Q9NT62 AC018630.3-201ENST00000542637 96 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 AL929325.1-201ENST00000603096 117 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 AL022345.2-201ENST00000606307 135 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.39□□□□□ -1.87
ATG3Q9NT62 MIR7515-201ENST00000637837 67 ntBASIC3.39□□□□□ -1.87
ATG3Q9NT62 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATG3Q9NT62 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ATG3Q9NT62 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms