Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 HSPE1P13-201ENST00000451143 297 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 MTATP8P1-201ENST00000467115 207 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 RPS26P55-201ENST00000471178 356 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 RNA5SP20-201ENST00000515976 84 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.9□□□□□ -2.11
DDX4Q9NQI0 AC008269.2-201ENST00000561915 1105 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 MIR4438-201ENST00000585271 93 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 AC037487.3-201ENST00000606668 112 ntBASIC1.9□□□□□ -2.11
DDX4Q9NQI0 SNORD81.1-201ENST00000363064 77 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.105-201ENST00000363182 111 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNU6-1309P-201ENST00000363305 108 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNU6-1019P-201ENST00000364424 107 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNU6-290P-201ENST00000365212 101 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNU6-1105P-201ENST00000384774 107 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNA5SP323-201ENST00000391094 133 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 MIR1302-3-201ENST00000408128 138 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.602-201ENST00000410535 92 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNU2-61P-201ENST00000411069 191 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNA5SP247-201ENST00000411181 105 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RN7SKP101-201ENST00000411376 320 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
DDX4Q9NQI0 AC099677.2-201ENST00000436385 175 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
DDX4Q9NQI0 AC005840.1-201ENST00000498412 377 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 AC097462.1-201ENST00000514125 324 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNU6-1278P-201ENST00000516130 107 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNU6-436P-201ENST00000516171 114 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 RNU1-142P-201ENST00000516682 145 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.89□□□□□ -2.11
DDX4Q9NQI0 AL359821.1-201ENST00000605519 182 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 uc_338.20-201ENST00000621563 178 ntBASIC1.89□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.64-201ENST00000362845 102 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 RNU4-13P-201ENST00000364019 141 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 RNU6-505P-201ENST00000384427 107 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 SNORA8-201ENST00000384574 139 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 SNORA53-201ENST00000391141 249 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 RPL31P63-201ENST00000422565 375 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 HSPE1P25-201ENST00000455484 251 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.88□□□□□ -2.11
DDX4Q9NQI0 MTCO2P24-201ENST00000515611 426 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 RNU7-99P-201ENST00000516271 62 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.88□□□□□ -2.11
DDX4Q9NQI0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.88□□□□□ -2.11
DDX4Q9NQI0 AC023157.2-201ENST00000540596 141 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 MIR5094-201ENST00000578766 85 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.88□□□□□ -2.11
DDX4Q9NQI0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
DDX4Q9NQI0 AC010615.1-201ENST00000594254 1764 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 RNU1-22P-201ENST00000363334 158 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.133-201ENST00000363428 110 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 RNU6-806P-201ENST00000365147 105 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.383-201ENST00000383855 97 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 snosnR66.1-201ENST00000391095 99 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 RPL21P38-201ENST00000418090 167 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.87□□□□□ -2.11
DDX4Q9NQI0 MTCYBP9-201ENST00000431021 303 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 RNU7-94P-201ENST00000459576 63 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.87□□□□□ -2.11
DDX4Q9NQI0 RNU6-966P-201ENST00000516479 104 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 RNU7-172P-201ENST00000517125 64 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.87□□□□□ -2.11
DDX4Q9NQI0 AC027419.1-201ENST00000522976 328 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 AC015720.1-201ENST00000565251 277 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 AL162730.1-201ENST00000605734 292 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.87□□□□□ -2.11
DDX4Q9NQI0 MIR8062-201ENST00000621515 85 ntBASIC1.87□□□□□ -2.11
DDX4Q9NQI0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
DDX4Q9NQI0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.86□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.47-201ENST00000362697 108 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 snoU2_19.2-201ENST00000363024 80 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.136-201ENST00000363444 102 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.329-201ENST00000365209 107 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 RNU6-102P-201ENST00000384485 104 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.556-201ENST00000384677 113 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.569-201ENST00000384749 103 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 RNU6-1186P-201ENST00000410429 97 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 EBAG9P1-201ENST00000418955 543 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.86□□□□□ -2.11
DDX4Q9NQI0 MTND3P2-201ENST00000438452 342 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 RPS26P45-201ENST00000471748 340 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 RN7SL274P-201ENST00000492268 272 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 RNVU1-2-201ENST00000516326 135 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.86□□□□□ -2.11
DDX4Q9NQI0 RPL21P9-201ENST00000556149 474 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 AL512598.1-201ENST00000610158 273 ntBASIC1.86□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.26-201ENST00000362539 101 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.84-201ENST00000363011 104 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 RNU6-238P-201ENST00000363313 106 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.124-201ENST00000363339 93 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 Y_RNA.286-201ENST00000364813 102 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 RNU6-326P-201ENST00000365480 107 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 MIR562-201ENST00000384894 95 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 RNA5SP467-201ENST00000391274 118 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 MIR1302-6-201ENST00000408466 90 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 TRBVB-201ENST00000477100 408 ntBASIC1.85□□□□□ -2.11
DDX4Q9NQI0 AC010409.1-201ENST00000487382 476 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms