Protein–RNA interactions for Protein: Q9HCE7

SMURF1, E3 ubiquitin-protein ligase SMURF1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1Q9HCE7 Y_RNA.343-201ENST00000365354 112 ntBASIC2.55□□□□□ -2
SMURF1Q9HCE7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMURF1Q9HCE7 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
SMURF1Q9HCE7 MIR483-201ENST00000385070 76 ntBASIC2.55□□□□□ -2
SMURF1Q9HCE7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.55□□□□□ -2
SMURF1Q9HCE7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
SMURF1Q9HCE7 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.55□□□□□ -2
SMURF1Q9HCE7 MIR4325-201ENST00000583049 90 ntBASIC2.55□□□□□ -2
SMURF1Q9HCE7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.55□□□□□ -2
SMURF1Q9HCE7 DNAJC19P2-201ENST00000593340 302 ntBASIC2.55□□□□□ -2
SMURF1Q9HCE7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.55□□□□□ -2
SMURF1Q9HCE7 AL162274.2-201ENST00000614406 332 ntBASIC2.55□□□□□ -2
SMURF1Q9HCE7 uc_338.4-201ENST00000616635 176 ntBASIC2.55□□□□□ -2
SMURF1Q9HCE7 Y_RNA.778-201ENST00000620203 90 ntBASIC2.55□□□□□ -2
SMURF1Q9HCE7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.55□□□□□ -2
SMURF1Q9HCE7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SMURF1Q9HCE7 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SMURF1Q9HCE7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMURF1Q9HCE7 Y_RNA.111-201ENST00000363248 100 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 RNU6-1209P-201ENST00000363655 107 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 SNORA33-201ENST00000363664 130 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 SNORD45.3-201ENST00000363836 72 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 Y_RNA.796-201ENST00000364268 102 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 Y_RNA.267-201ENST00000364679 109 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 Y_RNA.799-201ENST00000364992 102 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 SNORA48.2-201ENST00000390926 124 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 Y_RNA.622-201ENST00000411091 108 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.54□□□□□ -2
SMURF1Q9HCE7 AL606753.1-201ENST00000427435 87 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 RNU6-561P-201ENST00000516222 102 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 RNU6-1291P-201ENST00000516591 104 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 RNU6-126P-201ENST00000516685 103 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 AP002004.2-201ENST00000531656 154 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 AL049861.1-201ENST00000603130 150 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 AP001485.1-201ENST00000604799 199 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 AC022202.1-201ENST00000613515 211 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 AC012640.5-201ENST00000623897 319 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.54□□□□□ -2
SMURF1Q9HCE7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SMURF1Q9HCE7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.54□□□□□ -2
SMURF1Q9HCE7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
SMURF1Q9HCE7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 RNU6-151P-201ENST00000364158 107 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 RNU6-704P-201ENST00000364162 103 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 Y_RNA.432-201ENST00000384087 111 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 Y_RNA.488-201ENST00000384403 102 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 SNORD11-201ENST00000459124 84 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 HMGN1P7-201ENST00000491722 313 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 AL163195.1-201ENST00000496941 348 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 RNU6-1299P-201ENST00000516316 100 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.53□□□□□ -2
SMURF1Q9HCE7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.53□□□□□ -2
SMURF1Q9HCE7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.53□□□□□ -2
SMURF1Q9HCE7 MIR4658-201ENST00000584344 65 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 AC005000.2-201ENST00000605468 310 ntBASIC2.53□□□□□ -2
SMURF1Q9HCE7 AC022018.1-201ENST00000430685 241 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 AC003982.1-202ENST00000469928 248 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 Y_RNA.714-201ENST00000517065 90 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 AL160236.1-201ENST00000556317 195 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 MIR4662B-201ENST00000579498 81 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 MIR3605-201ENST00000583214 100 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 AC069114.2-201ENST00000604699 304 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SMURF1Q9HCE7 Y_RNA.215-201ENST00000364204 112 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 Y_RNA.242-201ENST00000364473 110 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 SNORA71.1-201ENST00000364523 117 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 SNORA9.2-201ENST00000365361 133 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 Y_RNA.521-201ENST00000384560 114 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 RNA5SP465-201ENST00000391195 109 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 SNORA26-201ENST00000391286 122 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 BX510359.4-201ENST00000423750 193 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 AC099677.2-201ENST00000436385 175 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 RPS27P1-201ENST00000450552 247 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 SNRPGP8-201ENST00000454064 226 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 SNORD77.4-201ENST00000516158 81 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 SNORD116-25-201ENST00000516517 92 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 RNU6-197P-201ENST00000516680 100 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 RNU2-56P-201ENST00000516826 190 ntBASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.51□□□□□ -2.01
SMURF1Q9HCE7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SMURF1Q9HCE7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.5□□□□□ -2.01
SMURF1Q9HCE7 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SMURF1Q9HCE7 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
SMURF1Q9HCE7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SMURF1Q9HCE7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
SMURF1Q9HCE7 RNU6-199P-201ENST00000362954 107 ntBASIC2.5□□□□□ -2.01
SMURF1Q9HCE7 Y_RNA.253-201ENST00000364562 112 ntBASIC2.5□□□□□ -2.01
SMURF1Q9HCE7 AC069257.2-201ENST00000441819 155 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 914.8 ms