Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AL163195.1-201ENST00000496941 348 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 RNU6-155P-201ENST00000516347 100 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.85□□□□□ -2.11
USP44Q9H0E7 AL162424.1-201ENST00000602325 221 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 U6.108-201ENST00000637764 58 ntBASIC1.85□□□□□ -2.11
USP44Q9H0E7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
USP44Q9H0E7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
USP44Q9H0E7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.84□□□□□ -2.11
USP44Q9H0E7 Y_RNA.124-201ENST00000363339 93 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 Y_RNA.210-201ENST00000364161 110 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 Y_RNA.214-201ENST00000364201 112 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 Y_RNA.361-201ENST00000365515 120 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 COX6CP10-201ENST00000416832 224 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 ELOCP20-201ENST00000422460 345 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 AL354695.1-201ENST00000427935 228 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 AC073910.1-201ENST00000445047 438 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 RNA5SP20-201ENST00000515976 84 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 SCARNA15.1-201ENST00000516384 125 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 AC023157.2-201ENST00000540596 141 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 AL353621.2-201ENST00000605340 133 ntBASIC1.84□□□□□ -2.11
USP44Q9H0E7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
USP44Q9H0E7 RNU4-30P-201ENST00000410245 143 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 RNU6-1186P-201ENST00000410429 97 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 RNU6-121P-201ENST00000410525 99 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.83□□□□□ -2.12
USP44Q9H0E7 JTBP1-201ENST00000441314 247 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 RNU7-95P-201ENST00000459222 64 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 snoU13.27-201ENST00000459278 104 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 AC097462.1-201ENST00000514125 324 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 SNORA31.24-201ENST00000517232 57 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 RNU7-128P-201ENST00000517247 62 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 MIR4300-201ENST00000581016 96 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 AC011373.1-201ENST00000607270 237 ntBASIC1.83□□□□□ -2.12
USP44Q9H0E7 Y_RNA.26-201ENST00000362539 101 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 SNORD81.1-201ENST00000363064 77 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 RNU1-22P-201ENST00000363334 158 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 RNU6-806P-201ENST00000365147 105 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 SNORD115-46-201ENST00000390982 71 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 MIR934-201ENST00000401241 83 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 AL031003.1-201ENST00000404229 172 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 RN7SKP200-201ENST00000410564 320 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 RPL31P63-201ENST00000422565 375 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 HSPE1P13-201ENST00000451143 297 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 RNU6-436P-201ENST00000516171 114 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 RNU7-110P-201ENST00000516891 62 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 RNU7-172P-201ENST00000517125 64 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 RNA5SP437-201ENST00000517249 129 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.82□□□□□ -2.12
USP44Q9H0E7 MIR376A1-201ENST00000616574 68 ntBASIC1.82□□□□□ -2.12
USP44Q9H0E7 AC018630.2-201ENST00000534866 2403 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
USP44Q9H0E7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
USP44Q9H0E7 Y_RNA.276-201ENST00000364732 109 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 Y_RNA.286-201ENST00000364813 102 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 Y_RNA.331-201ENST00000365267 102 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 RNU6-407P-201ENST00000365280 104 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 RNU6-738P-201ENST00000384531 106 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 RPL21P1-201ENST00000399532 476 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 RPL23AP36-201ENST00000413895 458 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.81□□□□□ -2.12
USP44Q9H0E7 AC005042.3-201ENST00000453230 174 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 LINC01399-202ENST00000458450 244 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 MRPS35P2-201ENST00000508242 191 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.81□□□□□ -2.12
USP44Q9H0E7 Y_RNA.720-201ENST00000517166 92 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.81□□□□□ -2.12
USP44Q9H0E7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.81□□□□□ -2.12
USP44Q9H0E7 MIR4709-201ENST00000577272 72 ntBASIC1.81□□□□□ -2.12
USP44Q9H0E7 SNORD33-201ENST00000362761 85 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 RNU6-770P-201ENST00000363929 105 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 RNU6-324P-201ENST00000363957 106 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 MIR1267-201ENST00000408723 78 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.8□□□□□ -2.12
USP44Q9H0E7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.8□□□□□ -2.12
USP44Q9H0E7 MTATP8P1-201ENST00000467115 207 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 RPS26P55-201ENST00000471178 356 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 AC098869.1-201ENST00000481627 292 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 RNY3P15-201ENST00000516297 97 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 RNU7-28P-201ENST00000516759 62 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 SNORA40.15-201ENST00000516884 107 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 AL358944.1-201ENST00000528537 144 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 AL360085.1-201ENST00000604713 532 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 SNORA28-201ENST00000606769 126 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 AC127459.3-201ENST00000624328 466 ntBASIC1.8□□□□□ -2.12
USP44Q9H0E7 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.8□□□□□ -2.12
USP44Q9H0E7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.79□□□□□ -2.12
USP44Q9H0E7 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
USP44Q9H0E7 Y_RNA.19-201ENST00000362462 99 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 U8.1-201ENST00000362843 134 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 SNORD113-8-201ENST00000363497 74 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 Y_RNA.145-201ENST00000363527 102 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 Y_RNA.152-201ENST00000363578 100 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 Y_RNA.329-201ENST00000365209 107 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 RNU6-102P-201ENST00000384485 104 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 MIR520G-201ENST00000385064 90 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 RNU6-710P-201ENST00000410424 105 ntBASIC1.79□□□□□ -2.12
USP44Q9H0E7 RNU2-61P-201ENST00000411069 191 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms