Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 Y_RNA.124-201ENST00000363339 93 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 SNORD45.3-201ENST00000363836 72 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-234P-201ENST00000365229 104 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-1275P-201ENST00000391087 107 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 RPS29P24-201ENST00000486345 171 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 RPL23AP54-201ENST00000495129 419 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 RNA5SP20-201ENST00000515976 84 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 RNU2-34P-201ENST00000516534 121 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-197P-201ENST00000516680 100 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 AC090142.3-201ENST00000519012 385 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 AC018630.3-201ENST00000542637 96 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 MIR2681-201ENST00000581814 105 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 AC093831.2-201ENST00000624393 3427 ntBASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CNTNAP4Q9C0A0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-640P-201ENST00000363693 105 ntBASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 Y_RNA.164-201ENST00000363709 102 ntBASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 Y_RNA.584-201ENST00000391090 114 ntBASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 AL356320.1-201ENST00000429616 163 ntBASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 AL158147.1-201ENST00000443970 75 ntBASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 AC108210.2-201ENST00000503681 201 ntBASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-126P-201ENST00000516685 103 ntBASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 DEFB122-202ENST00000569013 197 ntBASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CNTNAP4Q9C0A0 AL359511.1-201ENST00000402970 211 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 AC023449.1-201ENST00000454464 154 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 AC010531.2-201ENST00000465012 153 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 RN7SL636P-201ENST00000497504 294 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 AC234781.5-201ENST00000508429 271 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 RNA5SP153-201ENST00000516498 76 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 RNA5SP380-201ENST00000517190 98 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-537P-201ENST00000517277 103 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 AC120024.3-201ENST00000603167 156 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CNTNAP4Q9C0A0 AC007256.1-201ENST00000392253 2765 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 U8.1-201ENST00000362843 134 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 Y_RNA.348-201ENST00000365403 103 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-1080P-201ENST00000383982 107 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 SNORA72-201ENST00000384339 132 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 SNORD116-13-201ENST00000384408 92 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 SNORA26.2-201ENST00000390922 122 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 AL031183.1-201ENST00000457667 207 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-498P-201ENST00000459468 107 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 SNRPGP3-201ENST00000469405 227 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-1299P-201ENST00000516316 100 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 AC107294.3-201ENST00000609211 526 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 AL021707.8-201ENST00000609428 183 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 AC090517.3-201ENST00000625170 141 ntBASIC3.21□□□□□ -1.89
CNTNAP4Q9C0A0 AC080128.1-201ENST00000474389 1917 ntBASIC3.21□□□□□ -1.9
CNTNAP4Q9C0A0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CNTNAP4Q9C0A0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.21□□□□□ -1.9
CNTNAP4Q9C0A0 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CNTNAP4Q9C0A0 RNU4-41P-201ENST00000364426 143 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 SNORD58C-201ENST00000365223 64 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 Y_RNA.432-201ENST00000384087 111 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 RNU6-49P-201ENST00000384256 107 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 RNU6-106P-201ENST00000384405 107 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 Y_RNA.587-201ENST00000391210 103 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 Y_RNA.622-201ENST00000411091 108 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 MICF-203ENST00000432679 129 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 AL591806.2-201ENST00000433122 173 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 AL031737.1-201ENST00000450125 223 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 Y_RNA.692-201ENST00000516627 105 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 AC025647.1-201ENST00000517879 253 ntBASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.2□□□□□ -1.9
CNTNAP4Q9C0A0 AL356292.1-201ENST00000283110 373 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 Y_RNA.4-201ENST00000362333 112 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 RNU6-508P-201ENST00000363231 103 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 Y_RNA.114-201ENST00000363265 113 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 RNU4-13P-201ENST00000364019 141 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 RNA5SP99-201ENST00000364020 114 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 Y_RNA.226-201ENST00000364337 114 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 RNU6-294P-201ENST00000364999 102 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 RNU6-1240P-201ENST00000365155 104 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 MIR548A3-201ENST00000385297 97 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 SNORA26-201ENST00000391286 122 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 RNU6-57P-201ENST00000411348 103 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 AC092185.1-201ENST00000491371 97 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 RNU6-781P-201ENST00000516377 101 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 RNU6-638P-201ENST00000516582 104 ntBASIC3.19□□□□□ -1.9
CNTNAP4Q9C0A0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 196.9 ms