Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 MIR410-201ENST00000362222 80 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 RNU6-874P-201ENST00000362390 105 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 RNA5SP361-201ENST00000362686 118 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 RNY1P16-201ENST00000363063 111 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 RNU6-510P-201ENST00000391239 108 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 RNU6-1050P-201ENST00000410388 107 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 RNA5SP475-201ENST00000410568 110 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 Z98949.2-201ENST00000440996 144 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 U8.22-201ENST00000459141 133 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 AL049830.1-201ENST00000468034 425 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 RNU6-1278P-201ENST00000516130 107 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 MIR4661-201ENST00000582720 75 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 AL117336.2-201ENST00000602435 335 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 MIR924-201ENST00000638017 53 ntBASIC0.85□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.115-201ENST00000363272 98 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.124-201ENST00000363339 93 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 Y_RNA.594-201ENST00000410373 140 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 RNU5A-5P-201ENST00000411054 116 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 AC233266.1-201ENST00000454518 96 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 RPL39P39-201ENST00000455840 151 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 SNORD124-201ENST00000459577 104 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 AP002001.1-203ENST00000534002 267 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 AC018638.8-201ENST00000588755 281 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 AC242852.1-201ENST00000612151 96 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 AC244015.1-201ENST00000622301 99 ntBASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
RPAP1Q9BWH6 RNU6-454P-201ENST00000364292 107 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 RNU6-117P-201ENST00000365415 107 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 SNORA80D-201ENST00000384488 135 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 RNU6-136P-201ENST00000384663 107 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 MIR548K-201ENST00000408406 116 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 RNA5SP193-201ENST00000410353 107 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 AC114482.1-201ENST00000418010 247 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 AC104332.1-201ENST00000440471 797 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 RPS26P48-201ENST00000491713 339 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 AC011352.1-201ENST00000512300 793 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 SCARNA16.2-201ENST00000516520 172 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 RNU6-1016P-201ENST00000516689 94 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 RNA5SP330-201ENST00000517096 96 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 MIR4711-201ENST00000578274 70 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 MIR3674-201ENST00000636576 68 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.358-201ENST00000365491 99 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 MIR873-201ENST00000401120 77 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 LINC01399-202ENST00000458450 244 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 RNU6-625P-201ENST00000459412 107 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 ACA64.5-201ENST00000516207 127 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 RNU6-1116P-201ENST00000517269 99 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 AC022868.1-201ENST00000517767 391 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 AL358944.1-201ENST00000528537 144 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 AC005828.6-201ENST00000606610 232 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.83□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.251-201ENST00000364551 99 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 RNU6-593P-201ENST00000364716 112 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 RNU6-318P-201ENST00000384283 103 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 RNU6-1215P-201ENST00000384441 102 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 MIR520G-201ENST00000385064 90 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 AL606490.4-201ENST00000423117 127 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 AL353997.1-201ENST00000432936 108 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 RPS3AP52-201ENST00000435639 297 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 AC117454.1-201ENST00000491120 168 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 AC069439.1-201ENST00000494739 167 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 RNU6-718P-201ENST00000516166 105 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 AC004812.1-201ENST00000540773 146 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 PRELID3BP2-201ENST00000605362 201 ntBASIC0.82□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.86-201ENST00000363020 111 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.258-201ENST00000364613 105 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 MIR200A-201ENST00000384875 90 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 MIR548F5-201ENST00000408421 86 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 MTND5P15-201ENST00000434246 349 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.655-201ENST00000515919 96 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.708-201ENST00000516950 96 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 RNU6-1096P-201ENST00000517089 102 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 AC009229.3-201ENST00000608056 282 ntBASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RPAP1Q9BWH6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 Y_RNA.243-201ENST00000364481 109 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 RNU6-969P-201ENST00000383900 105 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 MIR891A-201ENST00000401237 79 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 AC092423.1-201ENST00000430165 186 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 HMGN1P33-201ENST00000432945 451 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 SUMO1P2-201ENST00000452524 304 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 RPL7P42-201ENST00000481005 679 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 SNORA40.9-201ENST00000515895 93 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 RNU6-63P-201ENST00000516690 95 ntBASIC0.8□□□□□ -2.28
RPAP1Q9BWH6 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms