Protein–RNA interactions for Protein: Q9BQT9

CLSTN3, Calsyntenin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3Q9BQT9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 Y_RNA.26-201ENST00000362539 101 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-112P-201ENST00000363599 104 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-505P-201ENST00000384427 107 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP100-201ENST00000410903 110 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP59-201ENST00000410922 110 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AL358176.2-201ENST00000425769 204 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 FTH1P12-201ENST00000432137 551 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 RPS26P45-201ENST00000471748 340 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AL163195.1-201ENST00000496941 348 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AC025465.3-201ENST00000510570 311 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AL117187.1-201ENST00000555482 181 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AC010900.2-201ENST00000604508 210 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AC037487.3-201ENST00000606668 112 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 AL627230.6-201ENST00000611129 280 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-457P-201ENST00000363999 107 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 SNORA63D-201ENST00000364359 132 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 Y_RNA.269-201ENST00000364685 89 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-806P-201ENST00000365147 105 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-1105P-201ENST00000384774 107 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-1109P-201ENST00000391187 107 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-121P-201ENST00000410525 99 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 LINC01399-202ENST00000458450 244 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 RPL36AP21-201ENST00000490372 323 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 RNU6-635P-201ENST00000516651 102 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.91□□□□□ -2.1
CLSTN3Q9BQT9 Y_RNA.64-201ENST00000362845 102 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 RNY1P10-201ENST00000363268 113 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.176-201ENST00000363815 109 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.329-201ENST00000365209 107 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-376P-201ENST00000384731 106 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.581-201ENST00000391017 97 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 SNORA53-201ENST00000391141 249 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 RNU4-30P-201ENST00000410245 143 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 RNU2-61P-201ENST00000411069 191 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-966P-201ENST00000516479 104 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 AC008269.2-201ENST00000561915 1105 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 MIR4713-201ENST00000582691 75 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 AC018630.2-201ENST00000534866 2403 ntBASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-1309P-201ENST00000363305 108 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.133-201ENST00000363428 110 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.222-201ENST00000364264 102 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.383-201ENST00000383855 97 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 MIR520G-201ENST00000385064 90 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.602-201ENST00000410535 92 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 DYNLT3P2-201ENST00000442517 295 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 AC098869.1-201ENST00000481627 292 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 RN7SL274P-201ENST00000492268 272 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-496P-201ENST00000516145 99 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 AP003733.2-201ENST00000529409 171 ntBASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CLSTN3Q9BQT9 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 SNORD81.1-201ENST00000363064 77 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-238P-201ENST00000363313 106 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.512-201ENST00000384518 102 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-296P-201ENST00000384608 107 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.569-201ENST00000384749 103 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-360P-201ENST00000390944 104 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 snosnR66.1-201ENST00000391095 99 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 MIR4255-201ENST00000579351 72 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 AC073413.2-201ENST00000604332 360 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 U6.108-201ENST00000637764 58 ntBASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.88□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.124-201ENST00000363339 93 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.149-201ENST00000363558 117 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 SNORA33-201ENST00000363664 130 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 RNU4-13P-201ENST00000364019 141 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-290P-201ENST00000365212 101 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 RNU6-326P-201ENST00000365480 107 ntBASIC1.87□□□□□ -2.11
CLSTN3Q9BQT9 Y_RNA.456-201ENST00000384232 111 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 167.8 ms