Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC073869.9-201ENST00000641610 120 ntBASIC-0.99□□□□□ -2.57
COL12A1Q99715 SNORD115-23-201ENST00000364461 82 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 Y_RNA.461-201ENST00000384263 103 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 RNU6-658P-201ENST00000384606 106 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 MIR125B2-201ENST00000385128 89 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 UBE2D3P3-201ENST00000426992 425 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 AL606517.1-201ENST00000446914 387 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC-1□□□□□ -2.57
COL12A1Q99715 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1□□□□□ -2.57
COL12A1Q99715 SNORD92-201ENST00000585078 85 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 AC008608.1-201ENST00000603910 127 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 FTX_4.1-201ENST00000616291 147 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 SNORD115-25-201ENST00000362619 82 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 SNORD115-15-201ENST00000364809 81 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 SNORD115-35-201ENST00000365122 82 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 GMFBP1-201ENST00000467831 427 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 RNU5F-2P-201ENST00000516066 82 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 AC097478.2-201ENST00000610572 514 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 AL354696.1-201ENST00000614652 497 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 MTND3P20-201ENST00000407663 186 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 SNORD75.2-201ENST00000408784 58 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 MCFD2P1-201ENST00000417812 300 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 AC098592.1-201ENST00000419352 333 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 DPRXP1-201ENST00000426312 460 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 MTND1P4-201ENST00000435196 415 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 AC010531.2-201ENST00000465012 153 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 RNA5SP106-201ENST00000517274 100 ntBASIC-1□□□□□ -2.57
COL12A1Q99715 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-1□□□□□ -2.57
COL12A1Q99715 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 RNU6-400P-201ENST00000391173 106 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 RNU6-613P-201ENST00000410412 108 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 ELOCP20-201ENST00000422460 345 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 AC011352.1-201ENST00000512300 793 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 RNA5SP20-201ENST00000515976 84 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 RNU6-415P-201ENST00000516252 97 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 MTCO3P15-201ENST00000526563 574 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-1.01□□□□□ -2.57
COL12A1Q99715 BNIP3P30-201ENST00000601184 574 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 AC108081.1-201ENST00000604358 221 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 AC012531.4-201ENST00000616509 177 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.01□□□□□ -2.57
COL12A1Q99715 RNY3P4-201ENST00000384428 101 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 MIR520C-201ENST00000385005 87 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
COL12A1Q99715 RNU6-720P-201ENST00000516363 108 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 MIR3123-201ENST00000583417 75 ntBASIC-1.01□□□□□ -2.57
COL12A1Q99715 MIR548A2-201ENST00000384956 97 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AL592310.1-201ENST00000414330 671 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AL138752.1-201ENST00000452964 351 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 snoU13.16-201ENST00000459350 104 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AC110760.3-202ENST00000515177 371 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC-1.02□□□□□ -2.57
COL12A1Q99715 uc_338.10-201ENST00000621872 182 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AC006927.4-201ENST00000639187 543 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 MTND4P21-201ENST00000453886 1357 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 Y_RNA.265-201ENST00000364677 108 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 RNU6-701P-201ENST00000384059 107 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 SNORA24-201ENST00000384096 131 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 RNU6-190P-201ENST00000384154 102 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 RNU6-549P-201ENST00000384433 107 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 MT-TN-201ENST00000387400 73 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AC015724.1-201ENST00000478577 156 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AC010468.3-201ENST00000508225 458 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AL157687.1-201ENST00000554853 619 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 SNORA70.25-201ENST00000612741 95 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 AC244669.1-204ENST00000621564 178 ntBASIC-1.02□□□□□ -2.57
COL12A1Q99715 SGO1P1-201ENST00000603525 1447 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 RNA5SP48-201ENST00000363969 126 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 SNORD74.6-201ENST00000364796 70 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 SNORD115-10-201ENST00000365073 81 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 RNU6-258P-201ENST00000390884 101 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 RNU6-311P-201ENST00000516224 102 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 SNORD39.3-201ENST00000584451 71 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 AL606834.3-201ENST00000602615 496 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 AC078795.2-201ENST00000602835 1252 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 AL049861.1-201ENST00000603130 150 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 RNU6-580P-201ENST00000365159 107 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 RNU6-878P-201ENST00000384578 110 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 SNORD28-201ENST00000384706 75 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 RNU2-51P-201ENST00000410708 197 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 TPTE2P5-203ENST00000458118 728 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 RNA5SP47-201ENST00000517230 109 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 SNORA59B-202ENST00000578183 701 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 AC020891.4-201ENST00000605745 93 ntBASIC-1.03□□□□□ -2.57
COL12A1Q99715 RNU6-512P-201ENST00000364438 103 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 RNU6-746P-201ENST00000384112 109 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 MIR1302-7-201ENST00000408841 72 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.04□□□□□ -2.58
COL12A1Q99715 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 AC008521.1-201ENST00000587471 187 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.04□□□□□ -2.58
COL12A1Q99715 RNU6-622P-201ENST00000384272 103 ntBASIC-1.04□□□□□ -2.58
COL12A1Q99715 TIMM9P3-201ENST00000428659 274 ntBASIC-1.04□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms