Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU4-69P-201ENST00000410677 143 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 MIR4438-201ENST00000585271 93 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 AC012531.5-201ENST00000611375 151 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 AL137790.1-201ENST00000634283 177 ntBASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTNAP3BQ96NU0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 PWAR6-201ENST00000552334 4618 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 OTUD4P1-201ENST00000237841 3067 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 RNA5SP399-201ENST00000364003 117 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 SNORA14A-201ENST00000364773 135 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 RHEBP3-201ENST00000411920 351 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 AC003685.2-201ENST00000422795 395 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 AC010401.1-201ENST00000463867 348 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 RNU6-948P-201ENST00000516374 107 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 MIR4712-201ENST00000583750 82 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 MIR203B-201ENST00000636080 86 ntBASIC3.59□□□□□ -1.83
CNTNAP3BQ96NU0 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CNTNAP3BQ96NU0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-743P-201ENST00000364151 106 ntBASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 Y_RNA.253-201ENST00000364562 112 ntBASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-234P-201ENST00000365229 104 ntBASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 SNORD66.1-201ENST00000391230 76 ntBASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-498P-201ENST00000459468 107 ntBASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 AC145423.2-201ENST00000610631 239 ntBASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3BQ96NU0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-633P-201ENST00000362612 103 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 SNORD116-10-201ENST00000363791 102 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 Y_RNA.242-201ENST00000364473 110 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-679P-201ENST00000391003 106 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 MIR887-201ENST00000401258 79 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 RNU2-40P-201ENST00000410833 196 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 AC099677.2-201ENST00000436385 175 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 AC114801.3-201ENST00000510231 177 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 SCGB1D5P-201ENST00000515134 247 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 MIR449C-201ENST00000516047 92 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 RNU7-70P-201ENST00000516941 66 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 MIR5680-201ENST00000577577 84 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 MIR4435-1-201ENST00000582552 80 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 AC064859.1-201ENST00000624741 174 ntBASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.57□□□□□ -1.84
CNTNAP3BQ96NU0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 SNORD31B-201ENST00000364977 69 ntBASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 SNORD58A-201ENST00000383875 65 ntBASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 Y_RNA.440-201ENST00000384120 114 ntBASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 Z98941.1-201ENST00000407764 100 ntBASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 RPS23P4-201ENST00000487908 423 ntBASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 MIR4474-201ENST00000579189 78 ntBASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 AC087685.1-201ENST00000587507 141 ntBASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 AC095038.3-201ENST00000634439 195 ntBASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.56□□□□□ -1.84
CNTNAP3BQ96NU0 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-616P-201ENST00000384353 107 ntBASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 MIR520G-201ENST00000385064 90 ntBASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 TRBV12-1-201ENST00000479785 344 ntBASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 RPS29P21-201ENST00000496272 170 ntBASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 HSPE1P19-201ENST00000603327 295 ntBASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 AL359075.3-201ENST00000613288 217 ntBASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 MIR7702-201ENST00000621931 59 ntBASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CNTNAP3BQ96NU0 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 AL353746.1-201ENST00000566293 6881 ntBASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 SNORD9-201ENST00000362566 104 ntBASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 Y_RNA.37-201ENST00000362606 108 ntBASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 MIR548O-201ENST00000408583 114 ntBASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 Y_RNA.621-201ENST00000411065 96 ntBASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 AC107083.1-201ENST00000439643 279 ntBASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 RNU6-711P-201ENST00000517255 106 ntBASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.54□□□□□ -1.84
CNTNAP3BQ96NU0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms