Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 RNU6-277P-201ENST00000516272 106 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 AC091178.2-201ENST00000584401 117 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 AL162424.1-201ENST00000602325 221 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 MTND4LP32-201ENST00000636111 270 ntBASIC1.24□□□□□ -2.21
RPGRIP1Q96KN7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-961P-201ENST00000363893 105 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-926P-201ENST00000384075 107 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-1297P-201ENST00000384415 104 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 POLR2J4-204ENST00000418424 324 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 RNU7-169P-201ENST00000459456 61 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 RNU7-4P-201ENST00000516961 62 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 AC005730.3-201ENST00000583067 366 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 SNORD3E-202ENST00000627253 216 ntBASIC1.23□□□□□ -2.21
RPGRIP1Q96KN7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 Y_RNA.243-201ENST00000364481 109 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 Y_RNA.267-201ENST00000364679 109 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 RNY1P4-201ENST00000384595 115 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 MIR660-201ENST00000385235 97 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 RNU11-5P-201ENST00000391216 129 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-1278P-201ENST00000516130 107 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-1291P-201ENST00000516591 104 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 RNU6-341P-201ENST00000516973 96 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 AC144568.1-201ENST00000520139 137 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 UBE2V2P2-201ENST00000587677 504 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 SNORA28-201ENST00000606769 126 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 AC004467.1-201ENST00000615678 330 ntBASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
RPGRIP1Q96KN7 Y_RNA.259-201ENST00000364619 101 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 RNU6-117P-201ENST00000365415 107 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 Y_RNA.387-201ENST00000383918 102 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 RNU6-1310P-201ENST00000384153 107 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 RNU6-505P-201ENST00000384427 107 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 SNORD116-29-201ENST00000384516 83 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 MIR559-201ENST00000385188 96 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 ELOCP24-201ENST00000456370 334 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 RPL39P38-201ENST00000467018 153 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 RNU2-56P-201ENST00000516826 190 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 AC023442.1-201ENST00000531247 422 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 AC055872.1-201ENST00000570978 278 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 MIR4778-201ENST00000577635 80 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 MIR3664-201ENST00000579074 99 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 AL132765.2-201ENST00000610812 351 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 AC025253.1-201ENST00000613623 543 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 AC133104.2-201ENST00000615272 193 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 MIR8065-201ENST00000620577 100 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 AC106754.2-201ENST00000623006 233 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 AC127459.3-201ENST00000624328 466 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 MIR1302-1-201ENST00000637932 143 ntBASIC1.21□□□□□ -2.22
RPGRIP1Q96KN7 SNORA1B-201ENST00000362535 133 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 SNORA72.1-201ENST00000363485 129 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 SNORD115-30-201ENST00000364117 82 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 Y_RNA.314-201ENST00000365114 102 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 MIR618-201ENST00000385287 98 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 RNY4P36-201ENST00000391116 96 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 Y_RNA.605-201ENST00000410577 105 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 CALM2P4-201ENST00000430810 426 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 SUMO1P2-201ENST00000452524 304 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 OR9P1P-201ENST00000496431 281 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 RNA5SP168-201ENST00000516642 112 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 RNU6-63P-201ENST00000516690 95 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 RNU2-12P-201ENST00000517216 168 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 RN7SL793P-201ENST00000583259 296 ntBASIC1.2□□□□□ -2.22
RPGRIP1Q96KN7 Y_RNA.303-201ENST00000364998 94 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 Y_RNA.361-201ENST00000365515 120 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 RNU6-424P-201ENST00000384367 105 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 RNY3P4-201ENST00000384428 101 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 RNU6-136P-201ENST00000384663 107 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 MIR562-201ENST00000384894 95 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 RNU5A-5P-201ENST00000411054 116 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 FCF1P4-201ENST00000448326 183 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 AL133373.1-201ENST00000497098 94 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 RN7SKP88-201ENST00000516847 250 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 AP002004.2-201ENST00000531656 154 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 AC103810.9-201ENST00000606688 112 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 7SK.8-201ENST00000612110 250 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 7SK.11-201ENST00000615477 250 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 7SK.13-201ENST00000622040 250 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 AC138305.3-201ENST00000624988 240 ntBASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RPGRIP1Q96KN7 AC005592.1-201ENST00000566527 1640 ntBASIC1.18□□□□□ -2.22
RPGRIP1Q96KN7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RPGRIP1Q96KN7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.18□□□□□ -2.22
RPGRIP1Q96KN7 SNORD114-7-201ENST00000362520 77 ntBASIC1.18□□□□□ -2.22
RPGRIP1Q96KN7 RNU6-490P-201ENST00000362985 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms