Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 IGLV3-17-201ENST00000519099 244 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 MIR5694-201ENST00000581190 76 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 MIR3945-201ENST00000581853 98 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 AC005786.1-201ENST00000588553 154 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 MIR548AY-201ENST00000617669 107 ntBASIC2.16□□□□□ -2.06
CTHRC1Q96CG8 RNU6-862P-201ENST00000362804 105 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 RNU1-52P-201ENST00000384190 164 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 SNORA8.3-201ENST00000384679 139 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 RNA5SP508-201ENST00000411327 119 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 HMGB3P3-201ENST00000510526 400 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 AC024995.1-201ENST00000523014 93 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 AC015720.1-201ENST00000565251 277 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 SNORD53-201ENST00000579969 78 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 MIR5688-201ENST00000580619 83 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 AP003357.1-201ENST00000604497 148 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 SNORD14A-201ENST00000606526 91 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 AC004792.1-201ENST00000614523 137 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 Y_RNA.802-201ENST00000614892 130 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 MIR6766-201ENST00000622641 72 ntBASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CTHRC1Q96CG8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 SNORA8-201ENST00000384574 139 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 MIR520G-201ENST00000385064 90 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AL117342.1-201ENST00000404861 406 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 SNORA36B-201ENST00000410438 131 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 RNU4-53P-201ENST00000410828 140 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 BX510359.4-201ENST00000423750 193 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 PIGPP3-201ENST00000425307 415 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 RPL23AP54-201ENST00000495129 419 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AP002392.1-201ENST00000537692 208 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AC121758.2-201ENST00000553271 193 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AC073413.2-201ENST00000604332 360 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AC098479.1-201ENST00000609225 154 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AC064859.1-201ENST00000624741 174 ntBASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CTHRC1Q96CG8 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 RNU6-653P-201ENST00000363074 106 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 RNU6-923P-201ENST00000364753 107 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 RNU1-51P-201ENST00000365345 176 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 SNORA72-201ENST00000384339 132 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 MIR562-201ENST00000384894 95 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 RNA5SP465-201ENST00000391195 109 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 RNU7-94P-201ENST00000459576 63 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 AC008413.1-201ENST00000511864 177 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 RNY3P16-201ENST00000516338 101 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 CBX3P4-201ENST00000538909 354 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 AC127455.1-201ENST00000565496 145 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 MIR4724-201ENST00000579485 89 ntBASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.13□□□□□ -2.07
CTHRC1Q96CG8 MIR367-201ENST00000362299 68 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 MIR518A2-201ENST00000384966 87 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 MIR524-201ENST00000385242 87 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 MIR526A2-201ENST00000390198 65 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 RNU6-493P-201ENST00000391321 108 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 HMGN2P39-201ENST00000398005 273 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 SNORA3.2-201ENST00000408221 125 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 RNU1-41P-201ENST00000516161 162 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 RNU1-48P-201ENST00000516400 162 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 AC104984.5-201ENST00000586878 94 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 AL137847.3-201ENST00000611521 109 ntBASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
CTHRC1Q96CG8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 RNU4-17P-201ENST00000365598 141 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 MIR626-201ENST00000385032 94 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 MT-TR-201ENST00000387439 65 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 AC009310.1-201ENST00000414414 451 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 RNU7-120P-201ENST00000459334 63 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 RNA5SP281-201ENST00000516504 135 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 AC072026.1-201ENST00000605023 201 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 MIR203B-201ENST00000636080 86 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 ZNF658B-202ENST00000615961 3375 ntBASIC2.11□□□□□ -2.07
CTHRC1Q96CG8 AC018630.2-201ENST00000534866 2403 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 Y_RNA.7-201ENST00000362352 102 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 Y_RNA.24-201ENST00000362508 103 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 Y_RNA.270-201ENST00000364693 104 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 COX6CP10-201ENST00000416832 224 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 HMGN2P3-201ENST00000433603 273 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 HMGN2P5-201ENST00000436882 273 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 RNU6-437P-201ENST00000459408 95 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 AL163195.1-201ENST00000496941 348 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 RNU6-1096P-201ENST00000517089 102 ntBASIC2.1□□□□□ -2.07
CTHRC1Q96CG8 AC100767.1-201ENST00000528178 123 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 203.1 ms