Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.76□□□□□ -2.13
SLC44A1Q8WWI5 AC010900.2-201ENST00000604508 210 ntBASIC1.76□□□□□ -2.13
SLC44A1Q8WWI5 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.76□□□□□ -2.13
SLC44A1Q8WWI5 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.76□□□□□ -2.13
SLC44A1Q8WWI5 AC010615.1-201ENST00000594254 1764 ntBASIC1.76□□□□□ -2.13
SLC44A1Q8WWI5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.84-201ENST00000363011 104 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-1309P-201ENST00000363305 108 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-112P-201ENST00000363599 104 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.518-201ENST00000384552 113 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-296P-201ENST00000384608 107 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 MIR9-3-201ENST00000385084 90 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 RNA5SP323-201ENST00000391094 133 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 SNORA40.18-201ENST00000391200 128 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 RNA5SP212-201ENST00000391223 107 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 AC019129.1-201ENST00000403786 261 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 AC024067.1-201ENST00000426199 223 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 MTCYBP9-201ENST00000431021 303 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 MTND4LP30-201ENST00000454092 297 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.638-201ENST00000459374 113 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 HMGN1P10-201ENST00000474557 553 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 RPL36AP21-201ENST00000490372 323 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 RNU7-172P-201ENST00000517125 64 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 AC110588.1-201ENST00000559699 137 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 AC008269.2-201ENST00000561915 1105 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 DEFB117-201ENST00000602356 141 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 MIR8062-201ENST00000621515 85 ntBASIC1.75□□□□□ -2.13
SLC44A1Q8WWI5 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-326P-201ENST00000365480 107 ntBASIC1.74□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.541-201ENST00000384640 113 ntBASIC1.74□□□□□ -2.13
SLC44A1Q8WWI5 MIR215-201ENST00000384858 110 ntBASIC1.74□□□□□ -2.13
SLC44A1Q8WWI5 MIR520A-201ENST00000384862 85 ntBASIC1.74□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.74□□□□□ -2.13
SLC44A1Q8WWI5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.74□□□□□ -2.13
SLC44A1Q8WWI5 AC022254.1-201ENST00000567857 235 ntBASIC1.74□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.47-201ENST00000362697 108 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 RNA5SP99-201ENST00000364020 114 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.418-201ENST00000384029 102 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.569-201ENST00000384749 103 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 MIR583-201ENST00000384846 75 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-482P-201ENST00000391068 107 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-1248P-201ENST00000391096 64 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-1203P-201ENST00000410703 110 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 CYCSP49-201ENST00000420810 319 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 AL445685.2-201ENST00000422551 342 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 RNU7-94P-201ENST00000459576 63 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 AC010409.1-201ENST00000487382 476 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 AL163195.1-201ENST00000496941 348 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-1337P-201ENST00000516525 95 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 AC073413.2-201ENST00000604332 360 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
SLC44A1Q8WWI5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.368-201ENST00000365547 113 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 Y_RNA.512-201ENST00000384518 102 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 SNORA53-201ENST00000391141 249 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 MTND3P2-201ENST00000438452 342 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 HMGN2P23-201ENST00000456759 269 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 RNU6-548P-201ENST00000517083 115 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 AL161670.1-201ENST00000554348 137 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 RPL21P9-201ENST00000556149 474 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 AL162730.1-201ENST00000605734 292 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 U6.104-201ENST00000637979 90 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 AC018630.2-201ENST00000534866 2403 ntBASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.72□□□□□ -2.13
SLC44A1Q8WWI5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 RNU6-238P-201ENST00000363313 106 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 Y_RNA.376-201ENST00000365638 108 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 Y_RNA.456-201ENST00000384232 111 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 RNU6-472P-201ENST00000384299 107 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 MIR562-201ENST00000384894 95 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 snosnR66.1-201ENST00000391095 99 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 AL162725.1-201ENST00000435405 301 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 RPS27P1-201ENST00000450552 247 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 TRBVB-201ENST00000477100 408 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 RPL23AP63-201ENST00000498752 471 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 RNA5SP182-201ENST00000516064 82 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 RNU6-1338P-201ENST00000516328 91 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 RNU2-31P-201ENST00000516954 155 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 AC091178.2-201ENST00000584401 117 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 AC037487.3-201ENST00000606668 112 ntBASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.71□□□□□ -2.14
SLC44A1Q8WWI5 RNU4-80P-201ENST00000363200 141 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 Y_RNA.310-201ENST00000365063 113 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 Y_RNA.556-201ENST00000384677 113 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 RNU6-376P-201ENST00000384731 106 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 MIR520G-201ENST00000385064 90 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 SNORA26.9-201ENST00000391322 122 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 MIR1302-3-201ENST00000408128 138 ntBASIC1.7□□□□□ -2.14
SLC44A1Q8WWI5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms