Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL603914.1-201ENST00000401964 204 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 RN7SKP220-201ENST00000410611 288 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 Y_RNA.630-201ENST00000411370 108 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 AC244505.4-201ENST00000434905 287 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 SSXP5-201ENST00000443473 287 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 RN7SL429P-201ENST00000479090 223 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 RN7SL489P-201ENST00000486185 223 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 RN7SL327P-201ENST00000488659 223 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 AC018868.1-201ENST00000491307 315 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 CKS1BP2-201ENST00000497342 240 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 Y_RNA.690-201ENST00000516603 95 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.79□□□□□ -1.96
NUP43Q8NFH3 MTND5P34-201ENST00000568888 325 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.79□□□□□ -1.96
NUP43Q8NFH3 AL365205.2-201ENST00000594586 68 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 JPX_2.1-201ENST00000614161 69 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 RN7SL853P-201ENST00000617250 223 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 U6.95-201ENST00000636931 70 ntBASIC2.79□□□□□ -1.96
NUP43Q8NFH3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NUP43Q8NFH3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.79□□□□□ -1.96
NUP43Q8NFH3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NUP43Q8NFH3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
NUP43Q8NFH3 Y_RNA.52-201ENST00000362760 96 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 snoU2-30.2-201ENST00000362805 70 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 SNORA54-201ENST00000384281 123 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 MIR592-201ENST00000384959 97 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 AC011406.1-201ENST00000512440 370 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 SNORD33.1-201ENST00000516213 88 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 RNU6-126P-201ENST00000516685 103 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 EIF4BP1-201ENST00000554881 351 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.78□□□□□ -1.96
NUP43Q8NFH3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NUP43Q8NFH3 AL136360.1-201ENST00000503377 1900 ntBASIC2.78□□□□□ -1.97
NUP43Q8NFH3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUP43Q8NFH3 RNU6-755P-201ENST00000364400 103 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 RNU6-309P-201ENST00000364573 106 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 MIR624-201ENST00000385217 97 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 Y_RNA.617-201ENST00000410920 90 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 COTL1P1-201ENST00000422309 375 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 S100A11P2-201ENST00000467589 312 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 SNORA31.26-201ENST00000517250 137 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 AC007229.1-201ENST00000590455 412 ntBASIC2.77□□□□□ -1.97
NUP43Q8NFH3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.77□□□□□ -1.97
NUP43Q8NFH3 RNA5SP374-201ENST00000362939 125 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 SNORD58C-201ENST00000365223 64 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 RNU6-220P-201ENST00000390919 107 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 MIR891A-201ENST00000401237 79 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 RNA5SP127-201ENST00000411051 133 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.76□□□□□ -1.97
NUP43Q8NFH3 AP004217.1-201ENST00000480579 346 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 AC092185.1-201ENST00000491371 97 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 MRPS17P9-201ENST00000511924 393 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 RNU7-99P-201ENST00000516271 62 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 RNU6-1146P-201ENST00000516282 102 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 RNU6-365P-201ENST00000517113 106 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 AC133485.4-201ENST00000561835 220 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 AC138907.4-201ENST00000570107 226 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 AC108081.1-201ENST00000604358 221 ntBASIC2.76□□□□□ -1.97
NUP43Q8NFH3 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.76□□□□□ -1.97
NUP43Q8NFH3 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NUP43Q8NFH3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NUP43Q8NFH3 Y_RNA.253-201ENST00000364562 112 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 RNA5SP467-201ENST00000391274 118 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 RNU2-63P-201ENST00000410792 194 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 Y_RNA.621-201ENST00000411065 96 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.75□□□□□ -1.97
NUP43Q8NFH3 AC018634.1-201ENST00000437554 401 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 AL353689.1-201ENST00000438895 199 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 RPS26P45-201ENST00000471748 340 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 HMGN1P7-201ENST00000491722 313 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 CYCTP-201ENST00000504253 315 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 SNORA18.4-201ENST00000516440 124 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 RNU6-1061P-201ENST00000516530 99 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 RNU6-667P-201ENST00000517186 102 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 AL355297.2-201ENST00000604792 129 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 MIR338-201ENST00000636369 67 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 U6.108-201ENST00000637764 58 ntBASIC2.75□□□□□ -1.97
NUP43Q8NFH3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.75□□□□□ -1.97
NUP43Q8NFH3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUP43Q8NFH3 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUP43Q8NFH3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NUP43Q8NFH3 RNU6-647P-201ENST00000364243 107 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 SNORD18B-201ENST00000365659 72 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 SNORA1-201ENST00000384107 130 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 AC003685.2-201ENST00000422795 395 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 AC022018.1-201ENST00000430685 241 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.74□□□□□ -1.97
NUP43Q8NFH3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.74□□□□□ -1.97
NUP43Q8NFH3 Y_RNA.651-201ENST00000459380 103 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.74□□□□□ -1.97
NUP43Q8NFH3 RNU6-781P-201ENST00000516377 101 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 RNU6-1291P-201ENST00000516591 104 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 RNA5SP380-201ENST00000517190 98 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 AL353149.1-201ENST00000610667 244 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 AL162274.2-201ENST00000614406 332 ntBASIC2.74□□□□□ -1.97
NUP43Q8NFH3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms