Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 MIR5688-201ENST00000580619 83 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 MIR5007-201ENST00000583098 95 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 AL391903.3-201ENST00000612158 163 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 AC010297.1-201ENST00000623948 149 ntBASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.72□□□□□ -1.97
SHCBP1Q8NEM2 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 RNU1-91P-201ENST00000364746 163 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-144P-201ENST00000383951 107 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-1117P-201ENST00000384525 104 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-1081P-201ENST00000384537 107 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-959P-201ENST00000384671 107 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 Y_RNA.586-201ENST00000391146 98 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AC016925.1-201ENST00000458303 298 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AC010598.1-201ENST00000510378 103 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AC107027.2-201ENST00000512197 115 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-965P-201ENST00000516721 96 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AC027419.1-201ENST00000522976 328 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 MIR4446-201ENST00000578505 67 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 MIR4724-201ENST00000579485 89 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 MIR3199-1-201ENST00000582434 88 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 MIR5194-201ENST00000582634 120 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AL049779.4-201ENST00000604500 156 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AC091895.1-201ENST00000624494 256 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 MIR7157-201ENST00000635801 60 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 MIR3658-201ENST00000636291 56 ntBASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.71□□□□□ -1.98
SHCBP1Q8NEM2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AL356292.1-201ENST00000283110 373 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 MIR367-201ENST00000362299 68 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-407P-201ENST00000365280 104 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 MIR1289-2-201ENST00000408360 111 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 U6atac.2-201ENST00000408644 118 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 SNORA36B-201ENST00000410438 131 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-561P-201ENST00000516222 102 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 SCARNA3-201ENST00000517097 143 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AC004486.1-201ENST00000546846 233 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AC015712.3-201ENST00000559380 164 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 DEFB122-202ENST00000569013 197 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AC105245.1-201ENST00000581934 244 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AP003357.1-201ENST00000604497 148 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AC067747.1-201ENST00000608026 250 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AC012640.5-201ENST00000623897 319 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 MIR1248-201ENST00000629190 106 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AC080128.1-201ENST00000474389 1917 ntBASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.7□□□□□ -1.98
SHCBP1Q8NEM2 AC007336.1-201ENST00000576365 3828 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-271P-201ENST00000363858 105 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 RNU4-11P-201ENST00000365287 132 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-418P-201ENST00000384035 107 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 AL606845.1-201ENST00000404881 255 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-257P-201ENST00000410238 98 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 AL445687.1-201ENST00000439946 251 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 AL121914.1-201ENST00000450188 156 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 AL137159.1-201ENST00000452808 512 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 AC025647.1-201ENST00000517879 253 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 MIR548X2-201ENST00000579776 100 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 MIR3117-201ENST00000584034 78 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 DNAJC19P2-201ENST00000593340 302 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 Z82209.1-201ENST00000422141 2135 ntBASIC2.69□□□□□ -1.98
SHCBP1Q8NEM2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 SNORD114-1-201ENST00000362705 72 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-22P-201ENST00000384355 107 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 AC016909.1-201ENST00000415916 166 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 AL591806.2-201ENST00000433122 173 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-498P-201ENST00000459468 107 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 AC010409.1-201ENST00000487382 476 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 RNA5SP20-201ENST00000515976 84 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-63P-201ENST00000516690 95 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 AC127455.1-201ENST00000565496 145 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 POLR3GP1-201ENST00000594073 261 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 AL356280.1-201ENST00000603614 379 ntBASIC2.68□□□□□ -1.98
SHCBP1Q8NEM2 AC100821.1-201ENST00000523153 2479 ntBASIC2.67□□□□□ -1.98
SHCBP1Q8NEM2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-1323P-201ENST00000384025 107 ntBASIC2.67□□□□□ -1.98
SHCBP1Q8NEM2 MIR15B-201ENST00000385045 98 ntBASIC2.67□□□□□ -1.98
SHCBP1Q8NEM2 RNU6-1228P-201ENST00000391014 107 ntBASIC2.67□□□□□ -1.98
SHCBP1Q8NEM2 RNU2-51P-201ENST00000410708 197 ntBASIC2.67□□□□□ -1.98
SHCBP1Q8NEM2 AC006461.1-201ENST00000412637 326 ntBASIC2.67□□□□□ -1.98
SHCBP1Q8NEM2 MTATP6P29-201ENST00000415057 132 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms