Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SNORA4.2-201ENST00000365313 147 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 SNORA8-201ENST00000384574 139 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 AC107083.1-201ENST00000439643 279 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 AC087499.4-201ENST00000448505 178 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 RNU6-162P-201ENST00000516228 103 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 RNU6-795P-201ENST00000516323 103 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 SNORD45.4-201ENST00000516629 73 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 SNORA48.11-201ENST00000517015 89 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 AC087499.8-201ENST00000578406 226 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 MIR4694-201ENST00000578534 80 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 MIR3618-201ENST00000580330 88 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 AC012531.4-201ENST00000616509 177 ntBASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CCDC116Q8IYX3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 RNU6-170P-201ENST00000362832 104 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 Y_RNA.155-201ENST00000363632 101 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 RNU6-497P-201ENST00000365316 104 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 RNU6-242P-201ENST00000384359 107 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 MIR670-201ENST00000390142 98 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 AC096949.1-201ENST00000412047 152 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 SNX2P2-201ENST00000424553 323 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 AC004941.2-201ENST00000427009 228 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 AC078899.2-201ENST00000595282 212 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 MIR1255B1-201ENST00000636325 63 ntBASIC3.48□□□□□ -1.85
CCDC116Q8IYX3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 ICE2P2-201ENST00000483823 2787 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 MIR342-201ENST00000362212 99 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 RNU6-661P-201ENST00000362409 107 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 Y_RNA.73-201ENST00000362910 113 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 RNU6-832P-201ENST00000363319 107 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 Y_RNA.336-201ENST00000365307 109 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 RNU6-1276P-201ENST00000365372 104 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 SNORA70.4-201ENST00000365509 134 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 MIR577-201ENST00000385196 96 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 PTMAP2-201ENST00000397627 327 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 RPL23AP83-201ENST00000434984 473 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 MIR3944-201ENST00000581277 108 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 MIR5187-201ENST00000583479 76 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 MIR6075-201ENST00000620782 95 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 AC012442.3-202ENST00000636742 206 ntBASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC116Q8IYX3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
CCDC116Q8IYX3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 SNORD115-19-201ENST00000363098 82 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 SNORD115-18-201ENST00000363293 82 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 SNORD115-17-201ENST00000364612 82 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 Y_RNA.360-201ENST00000365512 102 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 SNORA80E-201ENST00000384744 137 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 MIR554-201ENST00000384874 96 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 AL627390.1-201ENST00000396055 340 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 RN7SKP200-201ENST00000410564 320 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 RNU6-733P-201ENST00000410759 104 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 AL109933.2-201ENST00000452651 260 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 RNA5SP367-201ENST00000516557 118 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 AC006130.2-201ENST00000586202 326 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 AL356280.1-201ENST00000603614 379 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 AL513534.2-201ENST00000603836 250 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 Y_RNA.773-201ENST00000607168 90 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 MIR203B-201ENST00000636080 86 ntBASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC116Q8IYX3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 RNU6-363P-201ENST00000362895 105 ntBASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 RNU6-409P-201ENST00000384114 104 ntBASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 RNA5SP144-201ENST00000410846 116 ntBASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 SNORA57.3-201ENST00000411095 141 ntBASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 RPS23P4-201ENST00000487908 423 ntBASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 SNORA67.7-201ENST00000516664 135 ntBASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 MIR3158-1-201ENST00000583596 81 ntBASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 CTSLP2-204ENST00000629029 392 ntBASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.45□□□□□ -1.86
CCDC116Q8IYX3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 AC008264.2-201ENST00000610193 3731 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 RNU4-67P-201ENST00000364569 141 ntBASIC3.44□□□□□ -1.86
CCDC116Q8IYX3 MIR515-2-201ENST00000384883 83 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms