Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 AC080128.1-201ENST00000474389 1917 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 PWAR6-201ENST00000552334 4618 ntBASIC3.5□□□□□ -1.85
LYSMD3Q7Z3D4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 MIR340-201ENST00000362125 95 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 RNU6-1099P-201ENST00000363533 107 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 SNORA33-201ENST00000363664 130 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 SNORD115-28-201ENST00000363931 81 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 RNY1P1-201ENST00000364372 112 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 RNU6-546P-201ENST00000383991 107 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 MIR491-201ENST00000384877 84 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 Y_RNA.601-201ENST00000410500 113 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 AC006539.3-201ENST00000454258 129 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 SNORA31.1-201ENST00000515993 133 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 SNORA31.5-201ENST00000516190 133 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 RNU2-35P-201ENST00000516446 142 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 SNORD36C-201ENST00000516733 66 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 RNU7-6P-201ENST00000516845 62 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 AL358944.1-201ENST00000528537 144 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 AC022149.2-201ENST00000621061 203 ntBASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
LYSMD3Q7Z3D4 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 RNU4-35P-201ENST00000362588 141 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 snoU2-30.2-201ENST00000362805 70 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 RNA5SP50-201ENST00000363731 107 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 Y_RNA.332-201ENST00000365271 113 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 Y_RNA.440-201ENST00000384120 114 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 RNA5SP467-201ENST00000391274 118 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 RPL39P39-201ENST00000455840 151 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 RN7SL330P-201ENST00000469709 307 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 RNU7-61P-201ENST00000515897 61 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 RNU2-13P-201ENST00000515909 113 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 AC022254.1-201ENST00000567857 235 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 IGLL4P-201ENST00000614590 133 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 AL021368.2-201ENST00000606125 5352 ntBASIC3.48□□□□□ -1.85
LYSMD3Q7Z3D4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 Y_RNA.547-201ENST00000384654 119 ntBASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 SNORD17-201ENST00000390930 237 ntBASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 AC099677.2-201ENST00000436385 175 ntBASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 AC009969.1-201ENST00000438726 172 ntBASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 RN7SL442P-201ENST00000473804 320 ntBASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 MIR5195-201ENST00000583555 115 ntBASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 MIR7153-201ENST00000637758 57 ntBASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.47□□□□□ -1.85
LYSMD3Q7Z3D4 AC091564.4-201ENST00000533934 2194 ntBASIC3.46□□□□□ -1.85
LYSMD3Q7Z3D4 MFSD8-233ENST00000641482 4860 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 MIR30E-201ENST00000362104 92 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-938P-201ENST00000411285 103 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 AC113410.1-201ENST00000505029 247 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-991P-201ENST00000516168 107 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-65P-201ENST00000516332 98 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 SNORA74D-201ENST00000516404 141 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 MIR3683-201ENST00000580847 82 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 U6.108-201ENST00000637764 58 ntBASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.46□□□□□ -1.86
LYSMD3Q7Z3D4 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 SNORA1B-201ENST00000362535 133 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 RNA5SP295-201ENST00000362655 121 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-497P-201ENST00000365316 104 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-442P-201ENST00000383968 104 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 Y_RNA.531-201ENST00000384589 121 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 RNVU1-14-201ENST00000384770 164 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 MIR490-201ENST00000384865 128 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-644P-201ENST00000391155 98 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 AL445646.1-201ENST00000431784 216 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 AL353689.1-201ENST00000438895 199 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 AL357552.1-201ENST00000445254 415 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 AL049830.1-201ENST00000468034 425 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 RNU6-162P-201ENST00000516228 103 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 HSPE1P19-201ENST00000603327 295 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 U7.3-201ENST00000616123 62 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
LYSMD3Q7Z3D4 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms