Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 MIR183-201ENST00000384958 110 ntBASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-1186P-201ENST00000410429 97 ntBASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 ATP5A1P2-201ENST00000412323 255 ntBASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 PRSS3P4-201ENST00000453323 162 ntBASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 RN7SL293P-201ENST00000481765 281 ntBASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 RN7SKP18-201ENST00000516005 275 ntBASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-856P-201ENST00000516959 98 ntBASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 RNU7-128P-201ENST00000517247 62 ntBASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RNFT1Q5M7Z0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 RNA5SP322-201ENST00000363617 119 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 SNORA1.1-201ENST00000364671 133 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-198P-201ENST00000384258 104 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 HMGN2P18-201ENST00000450680 270 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 AC110768.1-201ENST00000509222 400 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 SNORA4.4-201ENST00000515921 135 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 MIR4762-201ENST00000585261 75 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 AC007179.3-201ENST00000604976 235 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 U3.45-201ENST00000607547 219 ntBASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
RNFT1Q5M7Z0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 MIR423-201ENST00000362201 94 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 SNORD77B-201ENST00000391112 67 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 Z92545.1-201ENST00000411782 234 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 ARF4P2-201ENST00000430209 526 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 SNORA31.1-201ENST00000515993 133 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 SNORA31.5-201ENST00000516190 133 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 AC103810.1-201ENST00000579873 453 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 AL137849.1-201ENST00000604767 169 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 AC021613.1-201ENST00000623880 111 ntBASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNFT1Q5M7Z0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 Y_RNA.267-201ENST00000364679 109 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 RNU1-89P-201ENST00000384592 164 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 Y_RNA.609-201ENST00000410669 89 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 POLR2J4-204ENST00000418424 324 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 HMGN2P34-201ENST00000437647 269 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 AC107083.1-201ENST00000439643 279 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 RPL30P14-201ENST00000482744 348 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 AC093259.1-201ENST00000509755 300 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 SNORD59.2-201ENST00000516873 68 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 AP002004.2-201ENST00000531656 154 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 AC008011.1-201ENST00000545989 227 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 AL161756.2-201ENST00000604597 246 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 FAS-AS1.1-201ENST00000615327 126 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 AL512310.12-203ENST00000640543 90 ntBASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNFT1Q5M7Z0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-457P-201ENST00000363999 107 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 U8.5-201ENST00000364528 136 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 Y_RNA.336-201ENST00000365307 109 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 MIR490-201ENST00000384865 128 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 RNA5SP424-201ENST00000390988 115 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 RHEBP3-201ENST00000411920 351 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 SNX2P2-201ENST00000424553 323 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 Z98742.2-201ENST00000431564 187 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 AL049830.1-201ENST00000468034 425 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 RN7SL330P-201ENST00000469709 307 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 AL049873.1-201ENST00000480540 376 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 AC108729.3-201ENST00000513484 108 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 RNU6-711P-201ENST00000517255 106 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 AC103810.7-201ENST00000607821 91 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 MIR7975-201ENST00000619350 68 ntBASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNFT1Q5M7Z0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms