Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 RNU7-102P-201ENST00000458948 62 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 SNORA25.17-201ENST00000517184 124 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 AC234772.3-201ENST00000602277 528 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 AC005562.2-201ENST00000618264 111 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 AC106754.1-201ENST00000562632 1513 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 SNORD14.1-201ENST00000365609 90 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 RNU6-393P-201ENST00000384475 107 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MIR196A1-201ENST00000388006 70 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MIR454-201ENST00000390180 115 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MIR1284-201ENST00000408337 120 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 SNORD100-201ENST00000408573 76 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 ELOCP4-201ENST00000420090 333 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MTCO2P3-201ENST00000442543 421 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MIR18B-201ENST00000454574 71 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 RNU6-135P-201ENST00000516769 101 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 RNU6-685P-201ENST00000517088 95 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 AC068880.4-201ENST00000623082 495 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 Y_RNA.37-201ENST00000362606 108 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 RNU4-1-201ENST00000363925 141 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 RNU6-784P-201ENST00000384330 106 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MIR487A-201ENST00000385009 80 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MTCO3P8-201ENST00000453691 755 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MTND2P30-201ENST00000456663 382 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 AC091959.1-201ENST00000495857 238 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 AC107401.1-201ENST00000503426 685 ntBASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-0.39□□□□□ -2.47
CHD9Q3L8U1 MTCYBP4-201ENST00000401524 249 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 MTCO2P29-201ENST00000465212 189 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 RNU7-129P-201ENST00000516128 62 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 MTND1P5-201ENST00000517906 940 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 SNORD11B-201ENST00000607707 90 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 uc_338.4-201ENST00000616635 176 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 RNU6-428P-201ENST00000362942 107 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 RNU6-933P-201ENST00000384424 107 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 RNU6-205P-201ENST00000390858 107 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 AL355143.1-201ENST00000407101 841 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 MIR1257-201ENST00000408490 117 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 AC007327.1-201ENST00000447461 264 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 AC091133.4-201ENST00000511142 308 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 AC116353.3-201ENST00000511215 249 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 SNORA18.7-201ENST00000516910 131 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 MIR548AR-201ENST00000582191 57 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 MIR4264-201ENST00000583520 66 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 AC105081.1-201ENST00000617727 106 ntBASIC-0.4□□□□□ -2.47
CHD9Q3L8U1 SNORD45.3-201ENST00000363836 72 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 RNU6-934P-201ENST00000365154 107 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 SNORD116-12-201ENST00000384468 92 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 SNORD115.1-201ENST00000391109 76 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 AL365184.2-201ENST00000431139 435 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 AC069271.1-201ENST00000445577 156 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 MTCO2P6-201ENST00000463134 685 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 AC010493.1-201ENST00000513479 292 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 SNORA18.4-201ENST00000516440 124 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 AC109479.2-201ENST00000517842 174 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 MIR4676-201ENST00000583078 72 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 AC002044.1-201ENST00000606707 158 ntBASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.41□□□□□ -2.47
CHD9Q3L8U1 RNU6-880P-201ENST00000384526 107 ntBASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 AC006210.1-201ENST00000424882 111 ntBASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 MIR4639-201ENST00000584938 69 ntBASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 AC006504.8-201ENST00000621046 635 ntBASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 AL008636.1-201ENST00000625038 1018 ntBASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 AL163152.1-201ENST00000642001 374 ntBASIC-0.41□□□□□ -2.48
CHD9Q3L8U1 RNA5SP93-201ENST00000362525 114 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 RNU6-827P-201ENST00000365553 106 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 MIR452-201ENST00000385020 85 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 RPL21P38-201ENST00000418090 167 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AC112204.1-201ENST00000502591 103 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 SNORA31.14-201ENST00000516728 116 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AC068587.5-201ENST00000528506 175 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AP002802.2-201ENST00000605877 235 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AC010205.1-201ENST00000616668 449 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AL049777.1-201ENST00000622740 518 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 MIR802-201ENST00000390235 94 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 PCNPP3-201ENST00000393579 471 ntBASIC-0.42□□□□□ -2.48
CHD9Q3L8U1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms