Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AL031003.1-201ENST00000404229 172 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 RNU4-30P-201ENST00000410245 143 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 RNU2-61P-201ENST00000411069 191 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.27□□□□□ -2.21
CKAP4Q07065 AL591704.2-201ENST00000421658 181 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 MTCYBP9-201ENST00000431021 303 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.27□□□□□ -2.21
CKAP4Q07065 AC098869.1-201ENST00000481627 292 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.27□□□□□ -2.21
CKAP4Q07065 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.27□□□□□ -2.21
CKAP4Q07065 MIR4513-201ENST00000581077 86 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 U6.73-201ENST00000619194 103 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 MIR8062-201ENST00000621515 85 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 U6.108-201ENST00000637764 58 ntBASIC1.27□□□□□ -2.21
CKAP4Q07065 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.26□□□□□ -2.21
CKAP4Q07065 Y_RNA.47-201ENST00000362697 108 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 RNU4-90P-201ENST00000362773 141 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 RNU6-862P-201ENST00000362804 105 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 Y_RNA.84-201ENST00000363011 104 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 Y_RNA.176-201ENST00000363815 109 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 RNU6-21P-201ENST00000384710 107 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 RNU6-417P-201ENST00000384712 107 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 MIR215-201ENST00000384858 110 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 MIR515-2-201ENST00000384883 83 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 MIR515-1-201ENST00000384884 83 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 MTND3P2-201ENST00000438452 342 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 MRPS10P1-201ENST00000448483 130 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.26□□□□□ -2.21
CKAP4Q07065 YWHAEP4-201ENST00000505390 198 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.26□□□□□ -2.21
CKAP4Q07065 RNVU1-2-201ENST00000516326 135 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 RNU7-128P-201ENST00000517247 62 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 AL161670.1-201ENST00000554348 137 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 AL162730.1-201ENST00000605734 292 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.26□□□□□ -2.21
CKAP4Q07065 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.26□□□□□ -2.21
CKAP4Q07065 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.26□□□□□ -2.21
CKAP4Q07065 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CKAP4Q07065 ZNF209P-201ENST00000593450 2304 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 RNU1-22P-201ENST00000363334 158 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 Y_RNA.124-201ENST00000363339 93 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 Y_RNA.136-201ENST00000363444 102 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 Y_RNA.149-201ENST00000363558 117 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 SNORA33-201ENST00000363664 130 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 RNU6-271P-201ENST00000363858 105 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 RNU6-290P-201ENST00000365212 101 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 RNU6-117P-201ENST00000365415 107 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 RNU6-472P-201ENST00000384299 107 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 Y_RNA.512-201ENST00000384518 102 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 Y_RNA.541-201ENST00000384640 113 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 SNORA67.5-201ENST00000391036 107 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 MIR1253-201ENST00000408273 105 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 RNU6-1203P-201ENST00000410703 110 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 HSPE1P13-201ENST00000451143 297 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 SNORD13-201ENST00000459299 104 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 AC005908.1-201ENST00000468701 347 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 RPS26P55-201ENST00000471178 356 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.25□□□□□ -2.21
CKAP4Q07065 AC097462.1-201ENST00000514125 324 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 RNA5SP20-201ENST00000515976 84 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.25□□□□□ -2.21
CKAP4Q07065 AC024995.1-201ENST00000523014 93 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 AL137100.2-201ENST00000555786 315 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 SUB1P4-201ENST00000566062 339 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.25□□□□□ -2.21
CKAP4Q07065 MIR4422-201ENST00000581938 83 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
CKAP4Q07065 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CKAP4Q07065 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CKAP4Q07065 Y_RNA.329-201ENST00000365209 107 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 Y_RNA.376-201ENST00000365638 108 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 Y_RNA.383-201ENST00000383855 97 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 Y_RNA.418-201ENST00000384029 102 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 RNA5SP467-201ENST00000391274 118 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 Y_RNA.602-201ENST00000410535 92 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 RNA5SP100-201ENST00000410903 110 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 RNA5SP59-201ENST00000410922 110 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.24□□□□□ -2.21
CKAP4Q07065 EBAG9P1-201ENST00000418955 543 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.24□□□□□ -2.21
CKAP4Q07065 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.24□□□□□ -2.21
CKAP4Q07065 AC245047.4-201ENST00000433189 144 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 RPS29P28-201ENST00000446439 141 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 RPS26P45-201ENST00000471748 340 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 HMGN1P10-201ENST00000474557 553 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.24□□□□□ -2.21
CKAP4Q07065 SNORA70.12-201ENST00000516084 153 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 RNU7-99P-201ENST00000516271 62 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 RNU1-92P-201ENST00000517017 135 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 MIR4438-201ENST00000585271 93 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 MIR8074-201ENST00000615081 81 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.24□□□□□ -2.21
CKAP4Q07065 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.24□□□□□ -2.21
CKAP4Q07065 RNU6-238P-201ENST00000363313 106 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms