| FOXG1 | P55316 | RNU4-43P-201 | ENST00000410628 | 137 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AL031386.1-201 | ENST00000411940 | 142 nt | TSL 5 BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AL359853.2-201 | ENST00000442108 | 353 nt | TSL 2 BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AL513328.1-201 | ENST00000446460 | 224 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | SNORD65B-201 | ENST00000459126 | 73 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RNU7-57P-201 | ENST00000459540 | 60 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AC080013.2-201 | ENST00000460866 | 323 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RPL23AP54-201 | ENST00000495129 | 419 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | VCAN-AS1-202 | ENST00000513899 | 453 nt | TSL 3 BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RNU1-104P-201 | ENST00000517280 | 175 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AP003171.1-201 | ENST00000532770 | 266 nt | TSL 2 BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AC004486.1-201 | ENST00000546846 | 233 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AC127455.1-201 | ENST00000565496 | 145 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | MTND5P34-201 | ENST00000568888 | 325 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | MIR4765-201 | ENST00000585007 | 77 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AP003357.1-201 | ENST00000604497 | 148 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | U4.3-201 | ENST00000621047 | 82 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | Six3os1_7.1-201 | ENST00000621512 | 201 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | ANKRD20A9P-201 | ENST00000457997 | 2978 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | CCPG1-203 | ENST00000442196 | 3453 nt | APPRIS P1 TSL 2 BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | UHMK1-204 | ENST00000545294 | 8117 nt | TSL 2 BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | MTND5P32-201 | ENST00000560711 | 1802 nt | BASIC | 2.17 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RTL4-201 | ENST00000340433 | 2613 nt | APPRIS P1 BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | SNORA27.1-201 | ENST00000362604 | 124 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RNU6-461P-201 | ENST00000364195 | 107 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | SNORD114-30-201 | ENST00000364448 | 72 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RNY3P5-201 | ENST00000384127 | 102 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RNU6-1144P-201 | ENST00000384247 | 104 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | Y_RNA.584-201 | ENST00000391090 | 114 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | U6atac.2-201 | ENST00000408644 | 118 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AL158823.1-201 | ENST00000418441 | 478 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AC016717.1-201 | ENST00000448918 | 286 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RNU7-14P-201 | ENST00000459331 | 62 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AC010457.1-201 | ENST00000510469 | 458 nt | TSL 3 BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RN7SKP179-201 | ENST00000516126 | 217 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AC090142.3-201 | ENST00000519012 | 385 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AC090049.2-201 | ENST00000550377 | 109 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | MIR378D2-201 | ENST00000580636 | 98 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RPL30P11-203 | ENST00000598995 | 310 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | AC090517.3-201 | ENST00000625170 | 141 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | CENPCP1-201 | ENST00000533085 | 2578 nt | BASIC | 2.16 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RFESD-202 | ENST00000380005 | 2587 nt | TSL 2 BASIC | 2.15 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | PIK3C2G-203 | ENST00000535651 | 2497 nt | TSL 5 BASIC | 2.15 | □□□□□ -2.06 | | |
| FOXG1 | P55316 | RNA5SP456-201 | ENST00000364002 | 114 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | SNORA25.7-201 | ENST00000364375 | 127 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | SNORA67.1-201 | ENST00000364749 | 141 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | SNORA22-201 | ENST00000383907 | 134 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU6-1323P-201 | ENST00000384025 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU6-136P-201 | ENST00000384663 | 107 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU6-1328P-201 | ENST00000410938 | 106 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC097463.2-201 | ENST00000421074 | 142 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | EIF4EP4-201 | ENST00000424916 | 578 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU6-437P-201 | ENST00000459408 | 95 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | Y_RNA.709-201 | ENST00000516952 | 92 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | Y_RNA.712-201 | ENST00000517011 | 92 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | SCARNA3-201 | ENST00000517097 | 143 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC108081.1-201 | ENST00000604358 | 221 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC005972.2-201 | ENST00000604690 | 348 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AL670379.2-201 | ENST00000604983 | 252 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC046143.2-201 | ENST00000609789 | 160 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AL449363.1-201 | ENST00000617815 | 186 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | Z82209.1-201 | ENST00000422141 | 2135 nt | BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | SPAM1-206 | ENST00000460182 | 2154 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AKAP9-203 | ENST00000359028 | 12247 nt | APPRIS ALT2 TSL 5 BASIC | 2.15 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | U8.1-201 | ENST00000362843 | 134 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU4-41P-201 | ENST00000364426 | 143 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU6-597P-201 | ENST00000365620 | 102 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | MIR592-201 | ENST00000384959 | 97 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | SNORA40.5-201 | ENST00000391061 | 128 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AL359511.1-201 | ENST00000402970 | 211 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | SNORA79-201 | ENST00000408376 | 140 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | MIR1283-1-201 | ENST00000408494 | 87 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNA5SP511-201 | ENST00000410487 | 115 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AL135786.1-201 | ENST00000415892 | 214 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RPS26P55-201 | ENST00000471178 | 356 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | CYCTP-201 | ENST00000504253 | 315 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNA5SP20-201 | ENST00000515976 | 84 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | MIR3670-2-201 | ENST00000582974 | 65 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | MIR5092-201 | ENST00000583139 | 88 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | MIR3670-1-201 | ENST00000584160 | 65 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | MIR3670-3-201 | ENST00000584855 | 65 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | MIR3670-4-201 | ENST00000612260 | 65 nt | BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC108866.1-201 | ENST00000503073 | 2339 nt | TSL 5 BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | PCM1-222 | ENST00000524226 | 5955 nt | TSL 1 (best) BASIC | 2.14 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC080128.1-201 | ENST00000474389 | 1917 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | TBC1D31-206 | ENST00000518805 | 2201 nt | TSL 2 BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | ARHGAP28-204 | ENST00000419673 | 5492 nt | APPRIS P2 TSL 1 (best) BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | SNORD114-7-201 | ENST00000362520 | 77 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU6-508P-201 | ENST00000363231 | 103 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU6-57P-201 | ENST00000411348 | 103 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | Y_RNA.630-201 | ENST00000411370 | 108 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AL157709.1-201 | ENST00000412695 | 424 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC116666.1-201 | ENST00000453915 | 551 nt | TSL 5 BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC010598.1-201 | ENST00000510378 | 103 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC026436.1-201 | ENST00000510537 | 270 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | RNU6-772P-201 | ENST00000516042 | 105 nt | BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | AC068992.1-202 | ENST00000519280 | 270 nt | TSL 3 BASIC | 2.13 | □□□□□ -2.07 | | |
| FOXG1 | P55316 | Y_RNA.757-201 | ENST00000578934 | 114 nt | BASIC | 2.13 | □□□□□ -2.07 | | |