Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.6□□□□□ -2.15
PDX1P52945 RNU6-639P-201ENST00000384074 107 ntBASIC1.6□□□□□ -2.15
PDX1P52945 SNORA12.1-201ENST00000390873 148 ntBASIC1.6□□□□□ -2.15
PDX1P52945 RPL21P1-201ENST00000399532 476 ntBASIC1.6□□□□□ -2.15
PDX1P52945 AL078595.1-201ENST00000404458 226 ntBASIC1.6□□□□□ -2.15
PDX1P52945 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.6□□□□□ -2.15
PDX1P52945 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.6□□□□□ -2.15
PDX1P52945 AC069257.2-201ENST00000441819 155 ntBASIC1.6□□□□□ -2.15
PDX1P52945 AC005042.3-201ENST00000453230 174 ntBASIC1.6□□□□□ -2.15
PDX1P52945 AC091021.1-201ENST00000468051 388 ntBASIC1.6□□□□□ -2.15
PDX1P52945 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.6□□□□□ -2.15
PDX1P52945 RNU6-764P-201ENST00000516396 105 ntBASIC1.6□□□□□ -2.15
PDX1P52945 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.6□□□□□ -2.15
PDX1P52945 AL645939.4-201ENST00000604495 135 ntBASIC1.6□□□□□ -2.15
PDX1P52945 MIR376A1-201ENST00000616574 68 ntBASIC1.6□□□□□ -2.15
PDX1P52945 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.6□□□□□ -2.15
PDX1P52945 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
PDX1P52945 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.15
PDX1P52945 Y_RNA.329-201ENST00000365209 107 ntBASIC1.59□□□□□ -2.15
PDX1P52945 SNORD63-201ENST00000384262 68 ntBASIC1.59□□□□□ -2.15
PDX1P52945 SNORD116-13-201ENST00000384408 92 ntBASIC1.59□□□□□ -2.15
PDX1P52945 RNU5A-5P-201ENST00000411054 116 ntBASIC1.59□□□□□ -2.15
PDX1P52945 RNU2-61P-201ENST00000411069 191 ntBASIC1.59□□□□□ -2.15
PDX1P52945 ELOCP20-201ENST00000422460 345 ntBASIC1.59□□□□□ -2.15
PDX1P52945 AC010154.1-201ENST00000425857 269 ntBASIC1.59□□□□□ -2.15
PDX1P52945 AC245047.3-201ENST00000429428 127 ntBASIC1.59□□□□□ -2.15
PDX1P52945 SUMO1P2-201ENST00000452524 304 ntBASIC1.59□□□□□ -2.15
PDX1P52945 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.59□□□□□ -2.15
PDX1P52945 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.59□□□□□ -2.15
PDX1P52945 SNORA31.10-201ENST00000516482 106 ntBASIC1.59□□□□□ -2.15
PDX1P52945 RNU6-1337P-201ENST00000516525 95 ntBASIC1.59□□□□□ -2.15
PDX1P52945 Y_RNA.713-201ENST00000517013 96 ntBASIC1.59□□□□□ -2.15
PDX1P52945 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.59□□□□□ -2.15
PDX1P52945 MIR3145-201ENST00000580727 82 ntBASIC1.59□□□□□ -2.15
PDX1P52945 DEFB117-201ENST00000602356 141 ntBASIC1.59□□□□□ -2.15
PDX1P52945 AC011373.1-201ENST00000607270 237 ntBASIC1.59□□□□□ -2.15
PDX1P52945 MIR7111-201ENST00000619751 72 ntBASIC1.59□□□□□ -2.15
PDX1P52945 AC018630.2-201ENST00000534866 2403 ntBASIC1.59□□□□□ -2.16
PDX1P52945 Y_RNA.183-201ENST00000363882 113 ntBASIC1.58□□□□□ -2.16
PDX1P52945 RNU6-1011P-201ENST00000384668 107 ntBASIC1.58□□□□□ -2.16
PDX1P52945 RNU6-376P-201ENST00000384731 106 ntBASIC1.58□□□□□ -2.16
PDX1P52945 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PDX1P52945 RNU6-985P-201ENST00000410182 104 ntBASIC1.58□□□□□ -2.16
PDX1P52945 HSPE1P21-201ENST00000438283 308 ntBASIC1.58□□□□□ -2.16
PDX1P52945 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
PDX1P52945 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.58□□□□□ -2.16
PDX1P52945 snoU13.27-201ENST00000459278 104 ntBASIC1.58□□□□□ -2.16
PDX1P52945 AC005908.1-201ENST00000468701 347 ntBASIC1.58□□□□□ -2.16
PDX1P52945 TRMT112P2-201ENST00000512910 132 ntBASIC1.58□□□□□ -2.16
PDX1P52945 MIR3122-201ENST00000577243 73 ntBASIC1.58□□□□□ -2.16
PDX1P52945 AL929325.1-201ENST00000603096 117 ntBASIC1.58□□□□□ -2.16
PDX1P52945 AL355297.3-201ENST00000604082 446 ntBASIC1.58□□□□□ -2.16
PDX1P52945 AL512598.1-201ENST00000610158 273 ntBASIC1.58□□□□□ -2.16
PDX1P52945 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
PDX1P52945 MIR6079-201ENST00000635807 62 ntBASIC1.58□□□□□ -2.16
PDX1P52945 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.58□□□□□ -2.16
PDX1P52945 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.58□□□□□ -2.16
PDX1P52945 MIR337-201ENST00000362281 93 ntBASIC1.57□□□□□ -2.16
PDX1P52945 SNORD114-7-201ENST00000362520 77 ntBASIC1.57□□□□□ -2.16
PDX1P52945 SNORA63-201ENST00000363450 132 ntBASIC1.57□□□□□ -2.16
PDX1P52945 Y_RNA.214-201ENST00000364201 112 ntBASIC1.57□□□□□ -2.16
PDX1P52945 Y_RNA.380-201ENST00000365663 111 ntBASIC1.57□□□□□ -2.16
PDX1P52945 RNU6-21P-201ENST00000384710 107 ntBASIC1.57□□□□□ -2.16
PDX1P52945 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PDX1P52945 RPL21P38-201ENST00000418090 167 ntBASIC1.57□□□□□ -2.16
PDX1P52945 RPL31P63-201ENST00000422565 375 ntBASIC1.57□□□□□ -2.16
PDX1P52945 AL135790.2-201ENST00000437701 267 ntBASIC1.57□□□□□ -2.16
PDX1P52945 HSPE1P25-201ENST00000455484 251 ntBASIC1.57□□□□□ -2.16
PDX1P52945 RNU7-34P-201ENST00000459394 64 ntBASIC1.57□□□□□ -2.16
PDX1P52945 MRPS35P2-201ENST00000508242 191 ntBASIC1.57□□□□□ -2.16
PDX1P52945 AC091178.2-201ENST00000584401 117 ntBASIC1.57□□□□□ -2.16
PDX1P52945 AC127459.3-201ENST00000624328 466 ntBASIC1.57□□□□□ -2.16
PDX1P52945 AC095038.3-201ENST00000634439 195 ntBASIC1.57□□□□□ -2.16
PDX1P52945 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PDX1P52945 SNORD113-8-201ENST00000363497 74 ntBASIC1.56□□□□□ -2.16
PDX1P52945 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
PDX1P52945 RNU6-136P-201ENST00000384663 107 ntBASIC1.56□□□□□ -2.16
PDX1P52945 SNORD115-46-201ENST00000390982 71 ntBASIC1.56□□□□□ -2.16
PDX1P52945 AL590004.1-201ENST00000405321 300 ntBASIC1.56□□□□□ -2.16
PDX1P52945 Y_RNA.602-201ENST00000410535 92 ntBASIC1.56□□□□□ -2.16
PDX1P52945 AL390729.2-201ENST00000416137 156 ntBASIC1.56□□□□□ -2.16
PDX1P52945 LINC01399-202ENST00000458450 244 ntBASIC1.56□□□□□ -2.16
PDX1P52945 AC099513.1-201ENST00000490423 301 ntBASIC1.56□□□□□ -2.16
PDX1P52945 AC025465.3-201ENST00000510570 311 ntBASIC1.56□□□□□ -2.16
PDX1P52945 SNORA70.12-201ENST00000516084 153 ntBASIC1.56□□□□□ -2.16
PDX1P52945 RNU6-1278P-201ENST00000516130 107 ntBASIC1.56□□□□□ -2.16
PDX1P52945 RNU6-1291P-201ENST00000516591 104 ntBASIC1.56□□□□□ -2.16
PDX1P52945 RNA5SP481-201ENST00000516814 122 ntBASIC1.56□□□□□ -2.16
PDX1P52945 AC015720.1-201ENST00000565251 277 ntBASIC1.56□□□□□ -2.16
PDX1P52945 AC004832.4-201ENST00000608952 331 ntBASIC1.56□□□□□ -2.16
PDX1P52945 MIR8054-201ENST00000620877 86 ntBASIC1.56□□□□□ -2.16
PDX1P52945 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
PDX1P52945 MIR424-201ENST00000362227 98 ntBASIC1.55□□□□□ -2.16
PDX1P52945 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
PDX1P52945 RNA5SP511-201ENST00000410487 115 ntBASIC1.55□□□□□ -2.16
PDX1P52945 HSPE1P13-201ENST00000451143 297 ntBASIC1.55□□□□□ -2.16
PDX1P52945 AC098869.1-201ENST00000481627 292 ntBASIC1.55□□□□□ -2.16
PDX1P52945 RNU6-496P-201ENST00000516145 99 ntBASIC1.55□□□□□ -2.16
PDX1P52945 SNORA40.15-201ENST00000516884 107 ntBASIC1.55□□□□□ -2.16
PDX1P52945 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms