Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.27□□□□□ -1.89
USP11P51784 AC090115.4-201ENST00000609970 188 ntBASIC3.27□□□□□ -1.89
USP11P51784 AC013412.1-201ENST00000610687 192 ntBASIC3.27□□□□□ -1.89
USP11P51784 Pinc.1-201ENST00000616452 154 ntBASIC3.27□□□□□ -1.89
USP11P51784 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
USP11P51784 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
USP11P51784 SNORA80A-201ENST00000363922 136 ntBASIC3.26□□□□□ -1.89
USP11P51784 RNU6-1138P-201ENST00000365359 106 ntBASIC3.26□□□□□ -1.89
USP11P51784 Y_RNA.346-201ENST00000365385 112 ntBASIC3.26□□□□□ -1.89
USP11P51784 RNU6-32P-201ENST00000383948 107 ntBASIC3.26□□□□□ -1.89
USP11P51784 RNU6-13P-201ENST00000384248 107 ntBASIC3.26□□□□□ -1.89
USP11P51784 RNU6-106P-201ENST00000384405 107 ntBASIC3.26□□□□□ -1.89
USP11P51784 RNU6-1235P-201ENST00000384559 107 ntBASIC3.26□□□□□ -1.89
USP11P51784 RNU6-12P-201ENST00000384604 107 ntBASIC3.26□□□□□ -1.89
USP11P51784 RNU6-41P-201ENST00000384741 107 ntBASIC3.26□□□□□ -1.89
USP11P51784 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
USP11P51784 MIR1289-1-201ENST00000408836 144 ntBASIC3.26□□□□□ -1.89
USP11P51784 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.26□□□□□ -1.89
USP11P51784 AC107083.1-201ENST00000439643 279 ntBASIC3.26□□□□□ -1.89
USP11P51784 RNU6-498P-201ENST00000459468 107 ntBASIC3.26□□□□□ -1.89
USP11P51784 MIR2681-201ENST00000581814 105 ntBASIC3.26□□□□□ -1.89
USP11P51784 MIR4765-201ENST00000585007 77 ntBASIC3.26□□□□□ -1.89
USP11P51784 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.26□□□□□ -1.89
USP11P51784 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
USP11P51784 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
USP11P51784 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
USP11P51784 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
USP11P51784 RNU6-1240P-201ENST00000365155 104 ntBASIC3.25□□□□□ -1.89
USP11P51784 Y_RNA.369-201ENST00000365568 117 ntBASIC3.25□□□□□ -1.89
USP11P51784 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
USP11P51784 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.25□□□□□ -1.89
USP11P51784 AL031737.1-201ENST00000450125 223 ntBASIC3.25□□□□□ -1.89
USP11P51784 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
USP11P51784 RN7SL499P-201ENST00000481141 276 ntBASIC3.25□□□□□ -1.89
USP11P51784 RPL23AP94-201ENST00000512518 302 ntBASIC3.25□□□□□ -1.89
USP11P51784 AC097462.1-201ENST00000514125 324 ntBASIC3.25□□□□□ -1.89
USP11P51784 SNORA18.4-201ENST00000516440 124 ntBASIC3.25□□□□□ -1.89
USP11P51784 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.25□□□□□ -1.89
USP11P51784 AL365205.2-201ENST00000594586 68 ntBASIC3.25□□□□□ -1.89
USP11P51784 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.25□□□□□ -1.89
USP11P51784 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP11P51784 SNORA1-201ENST00000384107 130 ntBASIC3.24□□□□□ -1.89
USP11P51784 RNA5SP127-201ENST00000411051 133 ntBASIC3.24□□□□□ -1.89
USP11P51784 AL135938.1-201ENST00000443141 297 ntBASIC3.24□□□□□ -1.89
USP11P51784 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.24□□□□□ -1.89
USP11P51784 RPS29P12-201ENST00000460178 152 ntBASIC3.24□□□□□ -1.89
USP11P51784 RPS29P24-201ENST00000486345 171 ntBASIC3.24□□□□□ -1.89
USP11P51784 SCARNA17.1-201ENST00000516211 143 ntBASIC3.24□□□□□ -1.89
USP11P51784 SCARNA17.2-201ENST00000516334 143 ntBASIC3.24□□□□□ -1.89
USP11P51784 RNU6-56P-201ENST00000516986 93 ntBASIC3.24□□□□□ -1.89
USP11P51784 RNU1-104P-201ENST00000517280 175 ntBASIC3.24□□□□□ -1.89
USP11P51784 AC018630.3-201ENST00000542637 96 ntBASIC3.24□□□□□ -1.89
USP11P51784 AC011604.1-201ENST00000545978 196 ntBASIC3.24□□□□□ -1.89
USP11P51784 SCARNA17.4-201ENST00000614296 143 ntBASIC3.24□□□□□ -1.89
USP11P51784 MIR1248-201ENST00000629190 106 ntBASIC3.24□□□□□ -1.89
USP11P51784 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
USP11P51784 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
USP11P51784 AC009487.4-201ENST00000624969 3585 ntBASIC3.23□□□□□ -1.89
USP11P51784 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
USP11P51784 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
USP11P51784 MIR512-1-201ENST00000384913 84 ntBASIC3.23□□□□□ -1.89
USP11P51784 AC008134.1-201ENST00000420943 193 ntBASIC3.23□□□□□ -1.89
USP11P51784 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.23□□□□□ -1.89
USP11P51784 HMGN2P18-201ENST00000450680 270 ntBASIC3.23□□□□□ -1.89
USP11P51784 AL021397.1-201ENST00000451806 248 ntBASIC3.23□□□□□ -1.89
USP11P51784 AC023449.1-201ENST00000454464 154 ntBASIC3.23□□□□□ -1.89
USP11P51784 OR9P1P-201ENST00000496431 281 ntBASIC3.23□□□□□ -1.89
USP11P51784 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.23□□□□□ -1.89
USP11P51784 RNA5SP236-201ENST00000516169 116 ntBASIC3.23□□□□□ -1.89
USP11P51784 RNU7-172P-201ENST00000517125 64 ntBASIC3.23□□□□□ -1.89
USP11P51784 AC024614.2-201ENST00000577584 372 ntBASIC3.23□□□□□ -1.89
USP11P51784 MIR4438-201ENST00000585271 93 ntBASIC3.23□□□□□ -1.89
USP11P51784 MIR7106-201ENST00000612419 65 ntBASIC3.23□□□□□ -1.89
USP11P51784 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.23□□□□□ -1.89
USP11P51784 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
USP11P51784 AL137790.1-201ENST00000634283 177 ntBASIC3.23□□□□□ -1.89
USP11P51784 MAPK10-322ENST00000641485 4530 ntBASIC3.23□□□□□ -1.89
USP11P51784 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.23□□□□□ -1.89
USP11P51784 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
USP11P51784 SNORA26-201ENST00000391286 122 ntBASIC3.22□□□□□ -1.89
USP11P51784 RNY4P30-201ENST00000410216 95 ntBASIC3.22□□□□□ -1.89
USP11P51784 RNU6-554P-201ENST00000410466 106 ntBASIC3.22□□□□□ -1.89
USP11P51784 NDUFA4P2-201ENST00000489989 244 ntBASIC3.22□□□□□ -1.89
USP11P51784 RNA5SP112-201ENST00000515937 99 ntBASIC3.22□□□□□ -1.89
USP11P51784 Y_RNA.677-201ENST00000516401 85 ntBASIC3.22□□□□□ -1.89
USP11P51784 RNA5SP367-201ENST00000516557 118 ntBASIC3.22□□□□□ -1.89
USP11P51784 RNU6-965P-201ENST00000516721 96 ntBASIC3.22□□□□□ -1.89
USP11P51784 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.22□□□□□ -1.89
USP11P51784 MIR3129-201ENST00000581095 76 ntBASIC3.22□□□□□ -1.89
USP11P51784 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USP11P51784 AC091564.4-201ENST00000533934 2194 ntBASIC3.22□□□□□ -1.89
USP11P51784 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
USP11P51784 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
USP11P51784 MIR1263-201ENST00000408324 86 ntBASIC3.21□□□□□ -1.9
USP11P51784 AL513477.1-202ENST00000417061 214 ntBASIC3.21□□□□□ -1.9
USP11P51784 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.21□□□□□ -1.9
USP11P51784 AF228730.3-201ENST00000436691 102 ntBASIC3.21□□□□□ -1.9
USP11P51784 RPS29P6-201ENST00000438196 145 ntBASIC3.21□□□□□ -1.9
USP11P51784 AC025750.2-201ENST00000442609 450 ntBASIC3.21□□□□□ -1.9
USP11P51784 PRELID2P1-201ENST00000552837 301 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms