Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AC004467.1-201ENST00000615678 330 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 AC127459.3-201ENST00000624328 466 ntBASIC0.81□□□□□ -2.28
CX3CR1P49238 RNU6-199P-201ENST00000362954 107 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 Y_RNA.265-201ENST00000364677 108 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 RNU6-376P-201ENST00000384731 106 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 Y_RNA.577-201ENST00000384794 101 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 MIR559-201ENST00000385188 96 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 RNA5SP475-201ENST00000410568 110 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 AC138393.2-201ENST00000414742 246 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 AL354751.2-201ENST00000415471 210 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 AC114482.1-201ENST00000418010 247 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 MTND4P28-201ENST00000426217 387 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 AC096644.2-201ENST00000429278 159 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.8□□□□□ -2.28
CX3CR1P49238 SNORA25.10-201ENST00000515926 124 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 RNU6-1096P-201ENST00000517089 102 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.8□□□□□ -2.28
CX3CR1P49238 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.8□□□□□ -2.28
CX3CR1P49238 SNORA28-201ENST00000606769 126 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 AL355073.2-201ENST00000612106 557 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 MTND4LP32-201ENST00000636111 270 ntBASIC0.8□□□□□ -2.28
CX3CR1P49238 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 AC104332.1-201ENST00000440471 797 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 RPS4XP11-201ENST00000446897 772 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 RPS26P48-201ENST00000491713 339 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.79□□□□□ -2.28
CX3CR1P49238 RNU6-470P-201ENST00000515954 104 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 SNORD79.1-201ENST00000516069 84 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 RNU6-1337P-201ENST00000516525 95 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 RNU2-56P-201ENST00000516826 190 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC0.79□□□□□ -2.28
CX3CR1P49238 AC090049.2-201ENST00000550377 109 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 AC084781.2-201ENST00000615568 161 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 AC240442.1-201ENST00000616055 283 ntBASIC0.79□□□□□ -2.28
CX3CR1P49238 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.79□□□□□ -2.28
CX3CR1P49238 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
CX3CR1P49238 SNORD114-24-201ENST00000365029 72 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 RNU6-1080P-201ENST00000383982 107 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 SNORA69.1-201ENST00000390904 137 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 SNORD12-201ENST00000391002 90 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.78□□□□□ -2.28
CX3CR1P49238 POLR2J4-204ENST00000418424 324 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.78□□□□□ -2.28
CX3CR1P49238 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.78□□□□□ -2.28
CX3CR1P49238 AC233266.1-201ENST00000454518 96 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.78□□□□□ -2.28
CX3CR1P49238 ELOCP24-201ENST00000456370 334 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 RNU7-12P-201ENST00000516030 62 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 RNU6-559P-201ENST00000516151 98 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 AP002004.2-201ENST00000531656 154 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 RPL21P9-201ENST00000556149 474 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CX3CR1P49238 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 AL359821.1-201ENST00000605519 182 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 AC242852.1-201ENST00000612151 96 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 AC025253.1-201ENST00000613623 543 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 AC244015.1-201ENST00000622301 99 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 AL008636.1-201ENST00000625038 1018 ntBASIC0.78□□□□□ -2.28
CX3CR1P49238 RNU6-392P-201ENST00000364926 101 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 Y_RNA.303-201ENST00000364998 94 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 AL451046.2-201ENST00000403074 277 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 AL031003.1-201ENST00000404229 172 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.77□□□□□ -2.29
CX3CR1P49238 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.77□□□□□ -2.29
CX3CR1P49238 RNU6-1278P-201ENST00000516130 107 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 RNU6-1012P-201ENST00000516606 109 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 MIR3684-201ENST00000579779 74 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 AL096861.1-201ENST00000610899 123 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 AC099654.14-201ENST00000638599 341 ntBASIC0.77□□□□□ -2.29
CX3CR1P49238 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CX3CR1P49238 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CX3CR1P49238 RNU6-20P-201ENST00000384106 107 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 RNY3P4-201ENST00000384428 101 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 MIR625-201ENST00000385047 85 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 RNU2-61P-201ENST00000411069 191 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 PIGPP3-201ENST00000425307 415 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 AL162725.1-201ENST00000435405 301 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 PDCD5P2-201ENST00000507570 312 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 RNU6-322P-201ENST00000516010 103 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 RNU6-307P-201ENST00000516743 106 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 RNU6-699P-201ENST00000517081 110 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 MIR2355-201ENST00000517199 87 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 AC113139.1-201ENST00000605049 239 ntBASIC0.76□□□□□ -2.29
CX3CR1P49238 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.76□□□□□ -2.29
CX3CR1P49238 SNORD114-2-201ENST00000363953 78 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 SNORA2.2-201ENST00000365473 135 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 Y_RNA.496-201ENST00000384444 101 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 SNORA80D-201ENST00000384488 135 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 RNA5SP482-201ENST00000391269 118 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 RNU2-54P-201ENST00000410299 190 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 AC098614.3-201ENST00000438957 440 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 AC093019.1-201ENST00000443135 252 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.75□□□□□ -2.29
CX3CR1P49238 RNU6-436P-201ENST00000516171 114 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 RNU7-28P-201ENST00000516759 62 ntBASIC0.75□□□□□ -2.29
CX3CR1P49238 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms