Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 MIR660-201ENST00000385235 97 ntBASIC1.56□□□□□ -2.16
HADHAP40939 MIR1302-11-201ENST00000408051 138 ntBASIC1.56□□□□□ -2.16
HADHAP40939 MIR1302-9-201ENST00000408365 138 ntBASIC1.56□□□□□ -2.16
HADHAP40939 MIR1302-10-201ENST00000408734 138 ntBASIC1.56□□□□□ -2.16
HADHAP40939 AL162725.1-201ENST00000435405 301 ntBASIC1.56□□□□□ -2.16
HADHAP40939 STAG3L5P-204ENST00000443759 179 ntBASIC1.56□□□□□ -2.16
HADHAP40939 U8.19-201ENST00000459095 133 ntBASIC1.56□□□□□ -2.16
HADHAP40939 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.56□□□□□ -2.16
HADHAP40939 AC022616.4-201ENST00000522985 181 ntBASIC1.56□□□□□ -2.16
HADHAP40939 SNORD53B-201ENST00000577887 78 ntBASIC1.56□□□□□ -2.16
HADHAP40939 MIR1302-2-201ENST00000607096 138 ntBASIC1.56□□□□□ -2.16
HADHAP40939 snoU13.31-201ENST00000607291 104 ntBASIC1.56□□□□□ -2.16
HADHAP40939 AC006157.1-201ENST00000611750 366 ntBASIC1.56□□□□□ -2.16
HADHAP40939 uc_338.22-201ENST00000622722 187 ntBASIC1.56□□□□□ -2.16
HADHAP40939 RNA5SP259-201ENST00000365541 109 ntBASIC1.55□□□□□ -2.16
HADHAP40939 SNORD42.2-201ENST00000365570 69 ntBASIC1.55□□□□□ -2.16
HADHAP40939 Y_RNA.458-201ENST00000384240 102 ntBASIC1.55□□□□□ -2.16
HADHAP40939 Y_RNA.460-201ENST00000384255 102 ntBASIC1.55□□□□□ -2.16
HADHAP40939 RNU6-1199P-201ENST00000411249 104 ntBASIC1.55□□□□□ -2.16
HADHAP40939 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
HADHAP40939 RNU6-1337P-201ENST00000516525 95 ntBASIC1.55□□□□□ -2.16
HADHAP40939 RNU6-1096P-201ENST00000517089 102 ntBASIC1.55□□□□□ -2.16
HADHAP40939 SNORD58B-201ENST00000607313 66 ntBASIC1.55□□□□□ -2.16
HADHAP40939 SNORA1B-201ENST00000362535 133 ntBASIC1.54□□□□□ -2.16
HADHAP40939 RNU6-324P-201ENST00000363957 106 ntBASIC1.54□□□□□ -2.16
HADHAP40939 RNU6-1175P-201ENST00000365200 107 ntBASIC1.54□□□□□ -2.16
HADHAP40939 Y_RNA.439-201ENST00000384119 94 ntBASIC1.54□□□□□ -2.16
HADHAP40939 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
HADHAP40939 SNORD63-201ENST00000384262 68 ntBASIC1.54□□□□□ -2.16
HADHAP40939 BTF3P4-201ENST00000418852 495 ntBASIC1.54□□□□□ -2.16
HADHAP40939 RPL39P38-201ENST00000467018 153 ntBASIC1.54□□□□□ -2.16
HADHAP40939 RPL30P7-201ENST00000479312 323 ntBASIC1.54□□□□□ -2.16
HADHAP40939 RNU6-436P-201ENST00000516171 114 ntBASIC1.54□□□□□ -2.16
HADHAP40939 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
HADHAP40939 AL512598.1-201ENST00000610158 273 ntBASIC1.54□□□□□ -2.16
HADHAP40939 SNORD3E-202ENST00000627253 216 ntBASIC1.54□□□□□ -2.16
HADHAP40939 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
HADHAP40939 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HADHAP40939 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
HADHAP40939 Y_RNA.80-201ENST00000362996 102 ntBASIC1.53□□□□□ -2.16
HADHAP40939 SNORA63.7-201ENST00000365579 123 ntBASIC1.53□□□□□ -2.16
HADHAP40939 SNORD14.1-201ENST00000365609 90 ntBASIC1.53□□□□□ -2.16
HADHAP40939 SNORA12.1-201ENST00000390873 148 ntBASIC1.53□□□□□ -2.16
HADHAP40939 MCFD2P1-201ENST00000417812 300 ntBASIC1.53□□□□□ -2.16
HADHAP40939 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.53□□□□□ -2.16
HADHAP40939 RPS27P16-201ENST00000425758 201 ntBASIC1.53□□□□□ -2.16
HADHAP40939 AC024067.1-201ENST00000426199 223 ntBASIC1.53□□□□□ -2.16
HADHAP40939 AL049830.1-201ENST00000468034 425 ntBASIC1.53□□□□□ -2.16
HADHAP40939 OR9P1P-201ENST00000496431 281 ntBASIC1.53□□□□□ -2.16
HADHAP40939 RNU6-1053P-201ENST00000515930 101 ntBASIC1.53□□□□□ -2.16
HADHAP40939 Y_RNA.676-201ENST00000516393 96 ntBASIC1.53□□□□□ -2.16
HADHAP40939 AL050343.2-201ENST00000607338 280 ntBASIC1.53□□□□□ -2.16
HADHAP40939 AL160413.1-201ENST00000622780 310 ntBASIC1.53□□□□□ -2.16
HADHAP40939 AC090574.1-201ENST00000623186 233 ntBASIC1.53□□□□□ -2.16
HADHAP40939 AC005592.1-201ENST00000566527 1640 ntBASIC1.52□□□□□ -2.17
HADHAP40939 RNU4-13P-201ENST00000364019 141 ntBASIC1.52□□□□□ -2.17
HADHAP40939 RNU6-424P-201ENST00000384367 105 ntBASIC1.52□□□□□ -2.17
HADHAP40939 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
HADHAP40939 RNU4-62P-201ENST00000410125 130 ntBASIC1.52□□□□□ -2.17
HADHAP40939 RN7SKP51-201ENST00000410781 304 ntBASIC1.52□□□□□ -2.17
HADHAP40939 AL354751.2-201ENST00000415471 210 ntBASIC1.52□□□□□ -2.17
HADHAP40939 AP1B1P2-201ENST00000416196 106 ntBASIC1.52□□□□□ -2.17
HADHAP40939 SNORA25.10-201ENST00000515926 124 ntBASIC1.52□□□□□ -2.17
HADHAP40939 RNU6-1291P-201ENST00000516591 104 ntBASIC1.52□□□□□ -2.17
HADHAP40939 AC019176.1-201ENST00000518519 225 ntBASIC1.52□□□□□ -2.17
HADHAP40939 SUMO2P16-201ENST00000519475 264 ntBASIC1.52□□□□□ -2.17
HADHAP40939 AC040926.1-201ENST00000530195 238 ntBASIC1.52□□□□□ -2.17
HADHAP40939 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
HADHAP40939 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.52□□□□□ -2.17
HADHAP40939 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
HADHAP40939 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
HADHAP40939 RNU4-76P-201ENST00000364509 141 ntBASIC1.51□□□□□ -2.17
HADHAP40939 Y_RNA.424-201ENST00000384063 103 ntBASIC1.51□□□□□ -2.17
HADHAP40939 Y_RNA.471-201ENST00000384312 102 ntBASIC1.51□□□□□ -2.17
HADHAP40939 SNORA67.6-201ENST00000391093 99 ntBASIC1.51□□□□□ -2.17
HADHAP40939 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
HADHAP40939 RNA5SP511-201ENST00000410487 115 ntBASIC1.51□□□□□ -2.17
HADHAP40939 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
HADHAP40939 DNAJC19P9-201ENST00000555084 351 ntBASIC1.51□□□□□ -2.17
HADHAP40939 AC011373.1-201ENST00000607270 237 ntBASIC1.51□□□□□ -2.17
HADHAP40939 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
HADHAP40939 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HADHAP40939 RNU1-42P-201ENST00000364033 160 ntBASIC1.5□□□□□ -2.17
HADHAP40939 Y_RNA.331-201ENST00000365267 102 ntBASIC1.5□□□□□ -2.17
HADHAP40939 Y_RNA.445-201ENST00000384168 102 ntBASIC1.5□□□□□ -2.17
HADHAP40939 Y_RNA.551-201ENST00000384661 102 ntBASIC1.5□□□□□ -2.17
HADHAP40939 RNU6-1105P-201ENST00000384774 107 ntBASIC1.5□□□□□ -2.17
HADHAP40939 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
HADHAP40939 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.5□□□□□ -2.17
HADHAP40939 MTND4P19-201ENST00000446659 478 ntBASIC1.5□□□□□ -2.17
HADHAP40939 RNA5SP168-201ENST00000516642 112 ntBASIC1.5□□□□□ -2.17
HADHAP40939 RNU6-63P-201ENST00000516690 95 ntBASIC1.5□□□□□ -2.17
HADHAP40939 SNORA31.24-201ENST00000517232 57 ntBASIC1.5□□□□□ -2.17
HADHAP40939 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.5□□□□□ -2.17
HADHAP40939 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
HADHAP40939 AL513534.2-201ENST00000603836 250 ntBASIC1.5□□□□□ -2.17
HADHAP40939 AL365434.2-201ENST00000607979 234 ntBASIC1.5□□□□□ -2.17
HADHAP40939 AL078604.3-201ENST00000615580 211 ntBASIC1.5□□□□□ -2.17
HADHAP40939 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.5□□□□□ -2.17
HADHAP40939 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms