Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 RNU5A-5P-201ENST00000411054 116 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.22□□□□□ -2.21
TRIM23P36406 RNU6-976P-201ENST00000516086 111 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 RNU6-699P-201ENST00000517081 110 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 SNORD116.3-201ENST00000517176 78 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 AC019288.1-201ENST00000557918 224 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 MIR6078-201ENST00000611069 100 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 AC084781.2-201ENST00000615568 161 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 AC004467.1-201ENST00000615678 330 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 AC240442.1-201ENST00000616055 283 ntBASIC1.22□□□□□ -2.21
TRIM23P36406 RNU6-1115P-201ENST00000362490 106 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 RNU6-961P-201ENST00000363893 105 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 Y_RNA.252-201ENST00000364556 101 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 RNU6-376P-201ENST00000384731 106 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 MIR660-201ENST00000385235 97 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 RNA5SP482-201ENST00000391269 118 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 RNU6-1304P-201ENST00000411374 106 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.21□□□□□ -2.22
TRIM23P36406 RPL39P38-201ENST00000467018 153 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 LARP7P1-201ENST00000605576 316 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 AC010205.1-201ENST00000616668 449 ntBASIC1.21□□□□□ -2.22
TRIM23P36406 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM23P36406 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TRIM23P36406 Y_RNA.796-201ENST00000364268 102 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 Y_RNA.799-201ENST00000364992 102 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 Y_RNA.466-201ENST00000384294 113 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 RNY3P14-201ENST00000384309 102 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 Y_RNA.529-201ENST00000384586 119 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 SNORA12.1-201ENST00000390873 148 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 AF228730.4-201ENST00000421457 183 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.2□□□□□ -2.22
TRIM23P36406 HMGN1P7-201ENST00000491722 313 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 RNU2-56P-201ENST00000516826 190 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 AL512310.8-201ENST00000550183 120 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 CYP3A52P-201ENST00000563326 91 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 AC005176.2-201ENST00000596933 147 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 MIR8065-201ENST00000620577 100 ntBASIC1.2□□□□□ -2.22
TRIM23P36406 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM23P36406 Y_RNA.315-201ENST00000365117 102 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 AL390729.2-201ENST00000416137 156 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 RNU7-169P-201ENST00000459456 61 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 AC091021.1-201ENST00000468051 388 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 MTND3P22-201ENST00000510932 243 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 SNORA40.14-201ENST00000516543 86 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 SUMO2P16-201ENST00000519475 264 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 AC023442.1-201ENST00000531247 422 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.19□□□□□ -2.22
TRIM23P36406 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.19□□□□□ -2.22
TRIM23P36406 MIR4659A-201ENST00000580269 81 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.19□□□□□ -2.22
TRIM23P36406 AL513534.2-201ENST00000603836 250 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 AL021879.1-201ENST00000611756 288 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 MIR4272-201ENST00000635924 64 ntBASIC1.19□□□□□ -2.22
TRIM23P36406 Y_RNA.265-201ENST00000364677 108 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.18□□□□□ -2.22
TRIM23P36406 RNU6-424P-201ENST00000384367 105 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 Y_RNA.526-201ENST00000384572 110 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 AL162725.1-201ENST00000435405 301 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.18□□□□□ -2.22
TRIM23P36406 STAG3L5P-204ENST00000443759 179 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 U8.19-201ENST00000459095 133 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 OR9P1P-201ENST00000496431 281 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 RN7SKP88-201ENST00000516847 250 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.18□□□□□ -2.22
TRIM23P36406 MIR3664-201ENST00000579074 99 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 7SK.8-201ENST00000612110 250 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 7SK.11-201ENST00000615477 250 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 MIR7111-201ENST00000619751 72 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 7SK.13-201ENST00000622040 250 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 SNORD3E-202ENST00000627253 216 ntBASIC1.18□□□□□ -2.22
TRIM23P36406 Y_RNA.39-201ENST00000362620 98 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 Y_RNA.124-201ENST00000363339 93 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 RNU6-626P-201ENST00000363354 107 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 Y_RNA.356-201ENST00000365475 113 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 Y_RNA.462-201ENST00000384268 102 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 MIR653-201ENST00000385279 96 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 AL031003.1-201ENST00000404229 172 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 RNU2-61P-201ENST00000411069 191 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.17□□□□□ -2.22
TRIM23P36406 AC022616.4-201ENST00000522985 181 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 AC006600.1-201ENST00000572529 153 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 MIR4423-201ENST00000580922 80 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 AC022441.3-201ENST00000605737 136 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 AC091895.1-201ENST00000624494 256 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 U6.92-201ENST00000636464 89 ntBASIC1.17□□□□□ -2.22
TRIM23P36406 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM23P36406 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM23P36406 SNORA1B-201ENST00000362535 133 ntBASIC1.16□□□□□ -2.22
TRIM23P36406 Y_RNA.101-201ENST00000363154 102 ntBASIC1.16□□□□□ -2.22
TRIM23P36406 Y_RNA.116-201ENST00000363292 103 ntBASIC1.16□□□□□ -2.22
TRIM23P36406 RNU4-76P-201ENST00000364509 141 ntBASIC1.16□□□□□ -2.22
TRIM23P36406 RNU6-926P-201ENST00000384075 107 ntBASIC1.16□□□□□ -2.22
TRIM23P36406 RNU6-20P-201ENST00000384106 107 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms