Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SNORD114-7-201ENST00000362520 77 ntBASIC1.3□□□□□ -2.2
GDF1P27539 Y_RNA.143-201ENST00000363520 106 ntBASIC1.3□□□□□ -2.2
GDF1P27539 Y_RNA.202-201ENST00000364083 110 ntBASIC1.3□□□□□ -2.2
GDF1P27539 Y_RNA.439-201ENST00000384119 94 ntBASIC1.3□□□□□ -2.2
GDF1P27539 SNORD63-201ENST00000384262 68 ntBASIC1.3□□□□□ -2.2
GDF1P27539 SNORA12.1-201ENST00000390873 148 ntBASIC1.3□□□□□ -2.2
GDF1P27539 RNA5SP323-201ENST00000391094 133 ntBASIC1.3□□□□□ -2.2
GDF1P27539 RPL21P1-201ENST00000399532 476 ntBASIC1.3□□□□□ -2.2
GDF1P27539 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.3□□□□□ -2.2
GDF1P27539 RNU6-155P-201ENST00000516347 100 ntBASIC1.3□□□□□ -2.2
GDF1P27539 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.3□□□□□ -2.2
GDF1P27539 AC113195.1-201ENST00000579952 141 ntBASIC1.3□□□□□ -2.2
GDF1P27539 AC073413.2-201ENST00000604332 360 ntBASIC1.3□□□□□ -2.2
GDF1P27539 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
GDF1P27539 Y_RNA.105-201ENST00000363182 111 ntBASIC1.29□□□□□ -2.2
GDF1P27539 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
GDF1P27539 RNU6-271P-201ENST00000363858 105 ntBASIC1.29□□□□□ -2.2
GDF1P27539 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.29□□□□□ -2.2
GDF1P27539 Y_RNA.389-201ENST00000383924 113 ntBASIC1.29□□□□□ -2.2
GDF1P27539 Y_RNA.455-201ENST00000384230 98 ntBASIC1.29□□□□□ -2.2
GDF1P27539 RNU6-505P-201ENST00000384427 107 ntBASIC1.29□□□□□ -2.2
GDF1P27539 Y_RNA.527-201ENST00000384573 102 ntBASIC1.29□□□□□ -2.2
GDF1P27539 RNU2-61P-201ENST00000411069 191 ntBASIC1.29□□□□□ -2.2
GDF1P27539 AC069257.2-201ENST00000441819 155 ntBASIC1.29□□□□□ -2.2
GDF1P27539 SUMO1P2-201ENST00000452524 304 ntBASIC1.29□□□□□ -2.2
GDF1P27539 RNU6-1053P-201ENST00000515930 101 ntBASIC1.29□□□□□ -2.2
GDF1P27539 RNU6-397P-201ENST00000516226 104 ntBASIC1.29□□□□□ -2.2
GDF1P27539 RNU7-172P-201ENST00000517125 64 ntBASIC1.29□□□□□ -2.2
GDF1P27539 RNU6-897P-201ENST00000517135 105 ntBASIC1.29□□□□□ -2.2
GDF1P27539 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
GDF1P27539 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.29□□□□□ -2.2
GDF1P27539 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
GDF1P27539 AC040896.1-201ENST00000613819 479 ntBASIC1.29□□□□□ -2.2
GDF1P27539 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.29□□□□□ -2.2
GDF1P27539 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.29□□□□□ -2.2
GDF1P27539 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.28□□□□□ -2.2
GDF1P27539 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
GDF1P27539 AL161722.3-201ENST00000605789 2983 ntBASIC1.28□□□□□ -2.2
GDF1P27539 U8.1-201ENST00000362843 134 ntBASIC1.28□□□□□ -2.2
GDF1P27539 Y_RNA.153-201ENST00000363615 91 ntBASIC1.28□□□□□ -2.2
GDF1P27539 Y_RNA.172-201ENST00000363765 102 ntBASIC1.28□□□□□ -2.2
GDF1P27539 Y_RNA.286-201ENST00000364813 102 ntBASIC1.28□□□□□ -2.2
GDF1P27539 Y_RNA.326-201ENST00000365176 113 ntBASIC1.28□□□□□ -2.2
GDF1P27539 SNORA63.7-201ENST00000365579 123 ntBASIC1.28□□□□□ -2.2
GDF1P27539 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.28□□□□□ -2.2
GDF1P27539 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
GDF1P27539 RNU4-30P-201ENST00000410245 143 ntBASIC1.28□□□□□ -2.2
GDF1P27539 RNU6-121P-201ENST00000410525 99 ntBASIC1.28□□□□□ -2.2
GDF1P27539 RNU5A-5P-201ENST00000411054 116 ntBASIC1.28□□□□□ -2.2
GDF1P27539 AL161935.2-201ENST00000414627 60 ntBASIC1.28□□□□□ -2.2
GDF1P27539 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.28□□□□□ -2.2
GDF1P27539 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.28□□□□□ -2.2
GDF1P27539 HSPE1P24-201ENST00000450782 238 ntBASIC1.28□□□□□ -2.2
GDF1P27539 RNU6-63P-201ENST00000516690 95 ntBASIC1.28□□□□□ -2.2
GDF1P27539 Y_RNA.721-201ENST00000517207 102 ntBASIC1.28□□□□□ -2.2
GDF1P27539 AP003072.1-201ENST00000531740 145 ntBASIC1.28□□□□□ -2.2
GDF1P27539 MIR4300-201ENST00000581016 96 ntBASIC1.28□□□□□ -2.2
GDF1P27539 AC091178.2-201ENST00000584401 117 ntBASIC1.28□□□□□ -2.2
GDF1P27539 AC006380.1-201ENST00000603598 186 ntBASIC1.28□□□□□ -2.2
GDF1P27539 AL157834.3-201ENST00000615543 103 ntBASIC1.28□□□□□ -2.2
GDF1P27539 AC095038.3-201ENST00000634439 195 ntBASIC1.28□□□□□ -2.2
GDF1P27539 AC018630.2-201ENST00000534866 2403 ntBASIC1.28□□□□□ -2.2
GDF1P27539 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
GDF1P27539 AL391987.6-201ENST00000305671 199 ntBASIC1.27□□□□□ -2.21
GDF1P27539 Y_RNA.183-201ENST00000363882 113 ntBASIC1.27□□□□□ -2.21
GDF1P27539 Y_RNA.214-201ENST00000364201 112 ntBASIC1.27□□□□□ -2.21
GDF1P27539 Y_RNA.329-201ENST00000365209 107 ntBASIC1.27□□□□□ -2.21
GDF1P27539 Y_RNA.380-201ENST00000365663 111 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AC117470.1-201ENST00000381974 330 ntBASIC1.27□□□□□ -2.21
GDF1P27539 RNU6-203P-201ENST00000384038 104 ntBASIC1.27□□□□□ -2.21
GDF1P27539 MIR320A-201ENST00000385302 82 ntBASIC1.27□□□□□ -2.21
GDF1P27539 RNU6-360P-201ENST00000390944 104 ntBASIC1.27□□□□□ -2.21
GDF1P27539 RNU6-101P-201ENST00000410323 104 ntBASIC1.27□□□□□ -2.21
GDF1P27539 RNU2-7P-201ENST00000410794 178 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AC004965.1-201ENST00000413033 213 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.27□□□□□ -2.21
GDF1P27539 ELOCP20-201ENST00000422460 345 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AC010154.1-201ENST00000425857 269 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AC005042.3-201ENST00000453230 174 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AC099513.1-201ENST00000490423 301 ntBASIC1.27□□□□□ -2.21
GDF1P27539 RNU6-1337P-201ENST00000516525 95 ntBASIC1.27□□□□□ -2.21
GDF1P27539 RNA5SP481-201ENST00000516814 122 ntBASIC1.27□□□□□ -2.21
GDF1P27539 Y_RNA.713-201ENST00000517013 96 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.27□□□□□ -2.21
GDF1P27539 SNORA77B-201ENST00000578179 125 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AL929325.1-201ENST00000603096 117 ntBASIC1.27□□□□□ -2.21
GDF1P27539 AC011373.1-201ENST00000607270 237 ntBASIC1.27□□□□□ -2.21
GDF1P27539 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.27□□□□□ -2.21
GDF1P27539 AC127459.3-201ENST00000624328 466 ntBASIC1.27□□□□□ -2.21
GDF1P27539 MIR6079-201ENST00000635807 62 ntBASIC1.27□□□□□ -2.21
GDF1P27539 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.26□□□□□ -2.21
GDF1P27539 Y_RNA.26-201ENST00000362539 101 ntBASIC1.26□□□□□ -2.21
GDF1P27539 Y_RNA.331-201ENST00000365267 102 ntBASIC1.26□□□□□ -2.21
GDF1P27539 SNORD116-13-201ENST00000384408 92 ntBASIC1.26□□□□□ -2.21
GDF1P27539 RNU6-102P-201ENST00000384485 104 ntBASIC1.26□□□□□ -2.21
GDF1P27539 MIR194-1-201ENST00000384892 85 ntBASIC1.26□□□□□ -2.21
GDF1P27539 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
GDF1P27539 SNORD115-46-201ENST00000390982 71 ntBASIC1.26□□□□□ -2.21
GDF1P27539 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.26□□□□□ -2.21
GDF1P27539 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms