Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.66□□□□□ -1.98
VAMP1P23763 AC080100.1-201ENST00000624239 5356 ntBASIC2.65□□□□□ -1.98
VAMP1P23763 SNORD45.3-201ENST00000363836 72 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 U8.5-201ENST00000364528 136 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 RN7SKP111-201ENST00000410349 271 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 RN7SKP51-201ENST00000410781 304 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 AC009310.1-201ENST00000414414 451 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.65□□□□□ -1.99
VAMP1P23763 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.65□□□□□ -1.99
VAMP1P23763 AC025518.1-201ENST00000479856 347 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 RN7SKP18-201ENST00000516005 275 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 SNORD77.4-201ENST00000516158 81 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 AC007336.1-201ENST00000576365 3828 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 MIR5685-201ENST00000579080 79 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.65□□□□□ -1.99
VAMP1P23763 SNORD3E-202ENST00000627253 216 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 MIR6830-201ENST00000636015 70 ntBASIC2.65□□□□□ -1.99
VAMP1P23763 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VAMP1P23763 RNU6-886P-201ENST00000384319 105 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 MIR891A-201ENST00000401237 79 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 RNA5SP274-201ENST00000410484 108 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 CALM2P4-201ENST00000430810 426 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.64□□□□□ -1.99
VAMP1P23763 SEPT7P4-201ENST00000437076 306 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 RPS29P7-201ENST00000439662 171 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 AC003982.1-202ENST00000469928 248 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 AP004217.1-201ENST00000480579 346 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 NDUFA4P2-201ENST00000489989 244 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 AC107027.2-201ENST00000512197 115 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 RNA5SP168-201ENST00000516642 112 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 RNU6-365P-201ENST00000517113 106 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 MIR4299-201ENST00000577899 72 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 MIR6895-201ENST00000613497 78 ntBASIC2.64□□□□□ -1.99
VAMP1P23763 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VAMP1P23763 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.64□□□□□ -1.99
VAMP1P23763 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
VAMP1P23763 Y_RNA.521-201ENST00000384560 114 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 SNORA80E-201ENST00000384744 137 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 AC114811.1-201ENST00000507207 168 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 MRPS17P9-201ENST00000511924 393 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 SCARNA16.3-201ENST00000516595 184 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 RNA5SP82-201ENST00000516707 92 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 MIR4431-201ENST00000579990 94 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 MIR4762-201ENST00000585261 75 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 AC008507.4-201ENST00000585464 127 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 AC021506.2-201ENST00000612354 169 ntBASIC2.63□□□□□ -1.99
VAMP1P23763 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.63□□□□□ -1.99
VAMP1P23763 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
VAMP1P23763 RNU6-1138P-201ENST00000365359 106 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 U8.11-201ENST00000384699 133 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 SNORA57.1-201ENST00000391227 145 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 U8.16-201ENST00000391279 133 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 MIR1267-201ENST00000408723 78 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 U8.18-201ENST00000459285 133 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 RPL21P10-201ENST00000463521 490 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 RN7SL633P-201ENST00000488974 297 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 IGKV2-26-201ENST00000518305 343 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 MIR4713-201ENST00000582691 75 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 uc_338.25-201ENST00000613756 156 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 AL513423.1-201ENST00000621695 132 ntBASIC2.62□□□□□ -1.99
VAMP1P23763 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.62□□□□□ -1.99
VAMP1P23763 RNU4-35P-201ENST00000362588 141 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 SNORD50B-201ENST00000364995 70 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 Y_RNA.336-201ENST00000365307 109 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 RNU6-643P-201ENST00000384018 107 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 RNU6-424P-201ENST00000384367 105 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 SNORD17-201ENST00000390930 237 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 PGBD4P5-201ENST00000445958 426 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 SNRPGP8-201ENST00000454064 226 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 AC074198.2-201ENST00000508153 258 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 RNU6-561P-201ENST00000516222 102 ntBASIC2.61□□□□□ -1.99
VAMP1P23763 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.61□□□□□ -1.99
VAMP1P23763 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VAMP1P23763 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VAMP1P23763 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VAMP1P23763 SNORD38C-201ENST00000384381 69 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 AL451074.5-201ENST00000415894 435 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 HMGN2P19-201ENST00000425149 265 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.6□□□□□ -1.99
VAMP1P23763 RN7SL807P-201ENST00000470923 297 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 AC005840.1-201ENST00000498412 377 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 RNU6-1116P-201ENST00000517269 99 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 AC007224.1-201ENST00000564410 144 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 MIR4276-201ENST00000584832 70 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 AC104465.1-201ENST00000611365 139 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 AC027279.3-201ENST00000625055 122 ntBASIC2.6□□□□□ -1.99
VAMP1P23763 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
VAMP1P23763 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VAMP1P23763 AL359837.1-201ENST00000381357 287 ntBASIC2.59□□□□□ -1.99
VAMP1P23763 SNORD72-201ENST00000390994 80 ntBASIC2.59□□□□□ -1.99
VAMP1P23763 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.59□□□□□ -1.99
VAMP1P23763 RNA5SP153-201ENST00000516498 76 ntBASIC2.59□□□□□ -1.99
VAMP1P23763 RNU6-197P-201ENST00000516680 100 ntBASIC2.59□□□□□ -1.99
VAMP1P23763 U3.45-201ENST00000607547 219 ntBASIC2.59□□□□□ -1.99
VAMP1P23763 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
VAMP1P23763 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
VAMP1P23763 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VAMP1P23763 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms