Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
NID1P14543 MIR1255A-201ENST00000408338 113 ntBASIC3.22□□□□□ -1.89
NID1P14543 Y_RNA.601-201ENST00000410500 113 ntBASIC3.22□□□□□ -1.89
NID1P14543 AC244505.4-201ENST00000434905 287 ntBASIC3.22□□□□□ -1.89
NID1P14543 AC009238.1-201ENST00000442165 424 ntBASIC3.22□□□□□ -1.89
NID1P14543 SSXP5-201ENST00000443473 287 ntBASIC3.22□□□□□ -1.89
NID1P14543 AC009237.6-201ENST00000446969 424 ntBASIC3.22□□□□□ -1.89
NID1P14543 RNU1-131P-201ENST00000458943 161 ntBASIC3.22□□□□□ -1.89
NID1P14543 RPL23AP67-201ENST00000465341 474 ntBASIC3.22□□□□□ -1.89
NID1P14543 RN7SKP18-201ENST00000516005 275 ntBASIC3.22□□□□□ -1.89
NID1P14543 SNORA70.18-201ENST00000516696 98 ntBASIC3.22□□□□□ -1.89
NID1P14543 RNU6-341P-201ENST00000516973 96 ntBASIC3.22□□□□□ -1.89
NID1P14543 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.22□□□□□ -1.89
NID1P14543 AL358944.1-201ENST00000528537 144 ntBASIC3.22□□□□□ -1.89
NID1P14543 MIR4474-201ENST00000579189 78 ntBASIC3.22□□□□□ -1.89
NID1P14543 MIR4305-201ENST00000583252 102 ntBASIC3.22□□□□□ -1.89
NID1P14543 MIR6079-201ENST00000635807 62 ntBASIC3.22□□□□□ -1.89
NID1P14543 AC080128.1-201ENST00000474389 1917 ntBASIC3.22□□□□□ -1.89
NID1P14543 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NID1P14543 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.22□□□□□ -1.89
NID1P14543 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NID1P14543 AL365361.1-201ENST00000566942 3481 ntBASIC3.21□□□□□ -1.89
NID1P14543 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NID1P14543 SNORD115-28-201ENST00000363931 81 ntBASIC3.21□□□□□ -1.9
NID1P14543 MIR184-201ENST00000384962 84 ntBASIC3.21□□□□□ -1.9
NID1P14543 MIR634-201ENST00000385208 97 ntBASIC3.21□□□□□ -1.9
NID1P14543 AC123900.1-201ENST00000420390 96 ntBASIC3.21□□□□□ -1.9
NID1P14543 FTH1P12-201ENST00000432137 551 ntBASIC3.21□□□□□ -1.9
NID1P14543 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.21□□□□□ -1.9
NID1P14543 AL031183.1-201ENST00000457667 207 ntBASIC3.21□□□□□ -1.9
NID1P14543 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.21□□□□□ -1.9
NID1P14543 RNU2-13P-201ENST00000515909 113 ntBASIC3.21□□□□□ -1.9
NID1P14543 RNA5SP395-201ENST00000516567 118 ntBASIC3.21□□□□□ -1.9
NID1P14543 AC091544.4-201ENST00000555268 342 ntBASIC3.21□□□□□ -1.9
NID1P14543 MIR7851-201ENST00000610611 160 ntBASIC3.21□□□□□ -1.9
NID1P14543 U7.8-201ENST00000619968 63 ntBASIC3.21□□□□□ -1.9
NID1P14543 U4.6-201ENST00000621618 127 ntBASIC3.21□□□□□ -1.9
NID1P14543 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.21□□□□□ -1.9
NID1P14543 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
NID1P14543 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.2□□□□□ -1.9
NID1P14543 Y_RNA.37-201ENST00000362606 108 ntBASIC3.2□□□□□ -1.9
NID1P14543 RNU6-546P-201ENST00000383991 107 ntBASIC3.2□□□□□ -1.9
NID1P14543 RNU6-242P-201ENST00000384359 107 ntBASIC3.2□□□□□ -1.9
NID1P14543 MIR522-201ENST00000385071 87 ntBASIC3.2□□□□□ -1.9
NID1P14543 AC060773.1-201ENST00000421698 310 ntBASIC3.2□□□□□ -1.9
NID1P14543 AC099677.2-201ENST00000436385 175 ntBASIC3.2□□□□□ -1.9
NID1P14543 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.2□□□□□ -1.9
NID1P14543 RPL39P39-201ENST00000455840 151 ntBASIC3.2□□□□□ -1.9
NID1P14543 RNU7-25P-201ENST00000516544 62 ntBASIC3.2□□□□□ -1.9
NID1P14543 RNU7-6P-201ENST00000516845 62 ntBASIC3.2□□□□□ -1.9
NID1P14543 RNU7-128P-201ENST00000517247 62 ntBASIC3.2□□□□□ -1.9
NID1P14543 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.2□□□□□ -1.9
NID1P14543 MIR4778-201ENST00000577635 80 ntBASIC3.2□□□□□ -1.9
NID1P14543 MIR3683-201ENST00000580847 82 ntBASIC3.2□□□□□ -1.9
NID1P14543 MIR4298-201ENST00000584380 73 ntBASIC3.2□□□□□ -1.9
NID1P14543 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
NID1P14543 FAM71BP1-201ENST00000604431 523 ntBASIC3.2□□□□□ -1.9
NID1P14543 AC006441.5-201ENST00000612680 209 ntBASIC3.2□□□□□ -1.9
NID1P14543 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.2□□□□□ -1.9
NID1P14543 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
NID1P14543 FAM35CP-201ENST00000554755 2470 ntBASIC3.2□□□□□ -1.9
NID1P14543 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NID1P14543 AL021368.2-201ENST00000606125 5352 ntBASIC3.2□□□□□ -1.9
NID1P14543 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.2□□□□□ -1.9
NID1P14543 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NID1P14543 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NID1P14543 snoU2-30.2-201ENST00000362805 70 ntBASIC3.19□□□□□ -1.9
NID1P14543 RNU6-1099P-201ENST00000363533 107 ntBASIC3.19□□□□□ -1.9
NID1P14543 RNU6-743P-201ENST00000364151 106 ntBASIC3.19□□□□□ -1.9
NID1P14543 RNU6-442P-201ENST00000383968 104 ntBASIC3.19□□□□□ -1.9
NID1P14543 Y_RNA.507-201ENST00000384500 99 ntBASIC3.19□□□□□ -1.9
NID1P14543 MIR128-1-201ENST00000384921 82 ntBASIC3.19□□□□□ -1.9
NID1P14543 MIR591-201ENST00000385290 95 ntBASIC3.19□□□□□ -1.9
NID1P14543 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
NID1P14543 SNORA48.2-201ENST00000390926 124 ntBASIC3.19□□□□□ -1.9
NID1P14543 RNU6-972P-201ENST00000391208 107 ntBASIC3.19□□□□□ -1.9
NID1P14543 RN7SKP111-201ENST00000410349 271 ntBASIC3.19□□□□□ -1.9
NID1P14543 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.19□□□□□ -1.9
NID1P14543 RNA5SP57-201ENST00000459463 123 ntBASIC3.19□□□□□ -1.9
NID1P14543 AC093259.1-201ENST00000509755 300 ntBASIC3.19□□□□□ -1.9
NID1P14543 PHBP14-201ENST00000512887 367 ntBASIC3.19□□□□□ -1.9
NID1P14543 SNORA31.1-201ENST00000515993 133 ntBASIC3.19□□□□□ -1.9
NID1P14543 SNORA31.5-201ENST00000516190 133 ntBASIC3.19□□□□□ -1.9
NID1P14543 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.19□□□□□ -1.9
NID1P14543 MIR3651-201ENST00000630427 90 ntBASIC3.19□□□□□ -1.9
NID1P14543 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NID1P14543 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.19□□□□□ -1.9
NID1P14543 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
NID1P14543 SNORA33-201ENST00000363664 130 ntBASIC3.18□□□□□ -1.9
NID1P14543 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
NID1P14543 U3.44-201ENST00000458938 192 ntBASIC3.18□□□□□ -1.9
NID1P14543 RNU7-61P-201ENST00000515897 61 ntBASIC3.18□□□□□ -1.9
NID1P14543 SNORD36C-201ENST00000516733 66 ntBASIC3.18□□□□□ -1.9
NID1P14543 AC022254.1-201ENST00000567857 235 ntBASIC3.18□□□□□ -1.9
NID1P14543 DLEU2_5.2-201ENST00000610606 84 ntBASIC3.18□□□□□ -1.9
NID1P14543 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.18□□□□□ -1.9
NID1P14543 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.18□□□□□ -1.9
NID1P14543 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NID1P14543 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.18□□□□□ -1.9
NID1P14543 MAPK10-362ENST00000641864 4484 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms