Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 SNORD18B-201ENST00000365659 72 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-905P-201ENST00000384434 107 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 MIR1261-201ENST00000408659 82 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-554P-201ENST00000410466 106 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-221P-201ENST00000459541 99 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-948P-201ENST00000516374 107 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 MIR3616-201ENST00000584070 92 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 AC106754.2-201ENST00000623006 233 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 SNORA50A-202ENST00000629536 136 ntBASIC3.89□□□□□ -1.79
CSB-PGBD3P0DP91 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 Y_RNA.634-201ENST00000364811 113 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 SNORA9.2-201ENST00000365361 133 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 Y_RNA.346-201ENST00000365385 112 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-418P-201ENST00000384035 107 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 RNA5SP511-201ENST00000410487 115 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 AC006539.3-201ENST00000454258 129 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 AC006483.1-201ENST00000487308 313 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 MIR3117-201ENST00000584034 78 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 AL929325.1-201ENST00000603096 117 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 AC092435.3-201ENST00000565538 3654 ntBASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CSB-PGBD3P0DP91 Y_RNA.52-201ENST00000362760 96 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 RNU2-70P-201ENST00000410718 179 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 TRBV12-1-201ENST00000479785 344 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 RNA5SP20-201ENST00000515976 84 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 RNA5SP153-201ENST00000516498 76 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 SCARNA20.6-201ENST00000517251 106 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 AC097639.2-201ENST00000603159 172 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 AL022345.2-201ENST00000606307 135 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 AC096644.4-201ENST00000563417 2912 ntBASIC3.87□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-271P-201ENST00000363858 105 ntBASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 AC010598.1-201ENST00000510378 103 ntBASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 SNORD77.4-201ENST00000516158 81 ntBASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 PRELID2P1-201ENST00000552837 301 ntBASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 AC091544.4-201ENST00000555268 342 ntBASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 AC015720.1-201ENST00000565251 277 ntBASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.86□□□□□ -1.79
CSB-PGBD3P0DP91 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-640P-201ENST00000363693 105 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 U8.6-201ENST00000364939 135 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 Y_RNA.348-201ENST00000365403 103 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-1235P-201ENST00000384559 107 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 AC003685.2-201ENST00000422795 395 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 TRIAP1P1-201ENST00000427062 225 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 RNU6-498P-201ENST00000459468 107 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 AC010531.2-201ENST00000465012 153 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 uc_338.4-201ENST00000616635 176 ntBASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CSB-PGBD3P0DP91 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.84□□□□□ -1.79
CSB-PGBD3P0DP91 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CSB-PGBD3P0DP91 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CSB-PGBD3P0DP91 MIR561-201ENST00000385216 97 ntBASIC3.84□□□□□ -1.79
CSB-PGBD3P0DP91 RPL23AP91-201ENST00000569211 455 ntBASIC3.84□□□□□ -1.79
CSB-PGBD3P0DP91 AC073476.4-201ENST00000628409 72 ntBASIC3.84□□□□□ -1.79
CSB-PGBD3P0DP91 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
CSB-PGBD3P0DP91 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CSB-PGBD3P0DP91 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 AL021368.2-201ENST00000606125 5352 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 AC009487.4-201ENST00000624969 3585 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 RNA5SP432-201ENST00000362480 116 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-117P-201ENST00000365415 107 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 MIR181A2-201ENST00000384863 110 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 AC104332.2-201ENST00000429959 156 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 RNA5SP217-201ENST00000515959 91 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 RNU6-991P-201ENST00000516168 107 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 MIR4425-201ENST00000580572 84 ntBASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CSB-PGBD3P0DP91 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 Y_RNA.281-201ENST00000364774 94 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 RNA5SP125-201ENST00000364843 120 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 Y_RNA.388-201ENST00000383919 113 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 MIR891A-201ENST00000401237 79 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 RNU2-48P-201ENST00000410694 191 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 RPL32P35-201ENST00000415214 394 ntBASIC3.82□□□□□ -1.8
CSB-PGBD3P0DP91 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms