Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 Y_RNA.456-201ENST00000384232 111 ntBASIC2.57□□□□□ -2
SNRPA1P09661 SNORD116-13-201ENST00000384408 92 ntBASIC2.57□□□□□ -2
SNRPA1P09661 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
SNRPA1P09661 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.57□□□□□ -2
SNRPA1P09661 MTCO1P44-201ENST00000441935 243 ntBASIC2.57□□□□□ -2
SNRPA1P09661 AC010409.1-201ENST00000487382 476 ntBASIC2.57□□□□□ -2
SNRPA1P09661 AC093259.1-201ENST00000509755 300 ntBASIC2.57□□□□□ -2
SNRPA1P09661 RNU6-1337P-201ENST00000516525 95 ntBASIC2.57□□□□□ -2
SNRPA1P09661 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.57□□□□□ -2
SNRPA1P09661 MIR5692C2-201ENST00000577959 77 ntBASIC2.57□□□□□ -2
SNRPA1P09661 MIR6845-201ENST00000613182 61 ntBASIC2.57□□□□□ -2
SNRPA1P09661 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.57□□□□□ -2
SNRPA1P09661 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.56□□□□□ -2
SNRPA1P09661 Y_RNA.332-201ENST00000365271 113 ntBASIC2.56□□□□□ -2
SNRPA1P09661 AC123900.1-201ENST00000420390 96 ntBASIC2.56□□□□□ -2
SNRPA1P09661 RPS20P10-201ENST00000451209 253 ntBASIC2.56□□□□□ -2
SNRPA1P09661 RNU7-141P-201ENST00000459304 62 ntBASIC2.56□□□□□ -2
SNRPA1P09661 RPS26P55-201ENST00000471178 356 ntBASIC2.56□□□□□ -2
SNRPA1P09661 RNU6-63P-201ENST00000516690 95 ntBASIC2.56□□□□□ -2
SNRPA1P09661 RNU6-548P-201ENST00000517083 115 ntBASIC2.56□□□□□ -2
SNRPA1P09661 MIR5089-201ENST00000580047 84 ntBASIC2.56□□□□□ -2
SNRPA1P09661 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.56□□□□□ -2
SNRPA1P09661 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.56□□□□□ -2
SNRPA1P09661 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
SNRPA1P09661 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNRPA1P09661 MIR340-201ENST00000362125 95 ntBASIC2.55□□□□□ -2
SNRPA1P09661 Y_RNA.293-201ENST00000364908 93 ntBASIC2.55□□□□□ -2
SNRPA1P09661 RNU6-1240P-201ENST00000365155 104 ntBASIC2.55□□□□□ -2
SNRPA1P09661 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
SNRPA1P09661 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
SNRPA1P09661 HSPE1P21-201ENST00000438283 308 ntBASIC2.55□□□□□ -2
SNRPA1P09661 AC011753.1-201ENST00000451001 220 ntBASIC2.55□□□□□ -2
SNRPA1P09661 RNA5SP20-201ENST00000515976 84 ntBASIC2.55□□□□□ -2
SNRPA1P09661 RNU6-1219P-201ENST00000516143 112 ntBASIC2.55□□□□□ -2
SNRPA1P09661 RNU2-34P-201ENST00000516534 121 ntBASIC2.55□□□□□ -2
SNRPA1P09661 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
SNRPA1P09661 AC100767.1-201ENST00000528178 123 ntBASIC2.55□□□□□ -2
SNRPA1P09661 AL353997.5-201ENST00000618886 171 ntBASIC2.55□□□□□ -2
SNRPA1P09661 AC068647.2-201ENST00000637380 353 ntBASIC2.55□□□□□ -2
SNRPA1P09661 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.55□□□□□ -2
SNRPA1P09661 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNRPA1P09661 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
SNRPA1P09661 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
SNRPA1P09661 RNU6-271P-201ENST00000363858 105 ntBASIC2.54□□□□□ -2
SNRPA1P09661 RNU6-899P-201ENST00000363947 107 ntBASIC2.54□□□□□ -2
SNRPA1P09661 RNU4-17P-201ENST00000365598 141 ntBASIC2.54□□□□□ -2
SNRPA1P09661 MIR583-201ENST00000384846 75 ntBASIC2.54□□□□□ -2
SNRPA1P09661 CYCSP49-201ENST00000420810 319 ntBASIC2.54□□□□□ -2
SNRPA1P09661 AC008134.1-201ENST00000420943 193 ntBASIC2.54□□□□□ -2
SNRPA1P09661 AL357134.1-201ENST00000445848 426 ntBASIC2.54□□□□□ -2
SNRPA1P09661 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.54□□□□□ -2
SNRPA1P09661 RNA5SP402-201ENST00000517148 110 ntBASIC2.54□□□□□ -2
SNRPA1P09661 SUMO2P18-201ENST00000518873 252 ntBASIC2.54□□□□□ -2
SNRPA1P09661 RNU2-4P-201ENST00000606190 192 ntBASIC2.54□□□□□ -2
SNRPA1P09661 AC004832.4-201ENST00000608952 331 ntBASIC2.54□□□□□ -2
SNRPA1P09661 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.54□□□□□ -2
SNRPA1P09661 AC009487.4-201ENST00000624969 3585 ntBASIC2.54□□□□□ -2
SNRPA1P09661 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.53□□□□□ -2
SNRPA1P09661 SNORD114-7-201ENST00000362520 77 ntBASIC2.53□□□□□ -2
SNRPA1P09661 HSPE1P13-201ENST00000451143 297 ntBASIC2.53□□□□□ -2
SNRPA1P09661 RPS27P22-201ENST00000478056 241 ntBASIC2.53□□□□□ -2
SNRPA1P09661 AC117454.1-201ENST00000491120 168 ntBASIC2.53□□□□□ -2
SNRPA1P09661 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.53□□□□□ -2
SNRPA1P09661 SNORA4.4-201ENST00000515921 135 ntBASIC2.53□□□□□ -2
SNRPA1P09661 Y_RNA.662-201ENST00000516028 97 ntBASIC2.53□□□□□ -2
SNRPA1P09661 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.53□□□□□ -2
SNRPA1P09661 AL049779.4-201ENST00000604500 156 ntBASIC2.53□□□□□ -2
SNRPA1P09661 AC245884.12-201ENST00000615364 59 ntBASIC2.53□□□□□ -2
SNRPA1P09661 AL159152.1-201ENST00000635019 2587 ntBASIC2.53□□□□□ -2.01
SNRPA1P09661 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 RNU6-1205P-201ENST00000363625 106 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 U8.7-201ENST00000364940 136 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 Y_RNA.571-201ENST00000384753 98 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 Y_RNA.572-201ENST00000384757 98 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 SNORA40.19-201ENST00000390846 128 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 AL355497.1-201ENST00000406262 551 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 AC060773.1-201ENST00000421698 310 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 AL603825.1-201ENST00000438481 80 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.52□□□□□ -2.01
SNRPA1P09661 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.52□□□□□ -2.01
SNRPA1P09661 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.52□□□□□ -2.01
SNRPA1P09661 RNU6-856P-201ENST00000516959 98 ntBASIC2.52□□□□□ -2.01
SNRPA1P09661 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SNRPA1P09661 Y_RNA.7-201ENST00000362352 102 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 RNU6-774P-201ENST00000363238 107 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 Y_RNA.240-201ENST00000364469 95 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 Y_RNA.435-201ENST00000384095 112 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 SNORA40.18-201ENST00000391200 128 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 AC009238.1-201ENST00000442165 424 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 AC009237.6-201ENST00000446969 424 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 RNU6-255P-201ENST00000516957 105 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 SNRPGP19-201ENST00000603826 189 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 MIR203B-201ENST00000636080 86 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 U6.106-201ENST00000636360 105 ntBASIC2.51□□□□□ -2.01
SNRPA1P09661 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SNRPA1P09661 ZNF720P1-201ENST00000562403 1939 ntBASIC2.5□□□□□ -2.01
SNRPA1P09661 Y_RNA.24-201ENST00000362508 103 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 290 ms