Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 RNU6-1056P-201ENST00000383996 107 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 RNU6-418P-201ENST00000384035 107 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 Y_RNA.432-201ENST00000384087 111 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 Y_RNA.563-201ENST00000384707 108 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 RNA5SP274-201ENST00000410484 108 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 RNU2-55P-201ENST00000411146 174 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 RNU2-32P-201ENST00000411193 191 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 AC016909.1-201ENST00000415916 166 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 CYCSP49-201ENST00000420810 319 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 AC022018.1-201ENST00000430685 241 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.69□□□□□ -1.98
CNOT4O95628 RPS27P22-201ENST00000478056 241 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 RNU2-34P-201ENST00000516534 121 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CNOT4O95628 SNORD14A-201ENST00000606526 91 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CNOT4O95628 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CNOT4O95628 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
CNOT4O95628 ZNF271P-202ENST00000465539 1970 ntBASIC2.69□□□□□ -1.98
CNOT4O95628 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CNOT4O95628 MIR449A-201ENST00000362113 91 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 RNU1-23P-201ENST00000363361 144 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 RNU6-1240P-201ENST00000365155 104 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 SNORA25B-201ENST00000365507 128 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 RNU6-1080P-201ENST00000383982 107 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 RNU6-484P-201ENST00000384016 107 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 SNORA72-201ENST00000384339 132 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 Y_RNA.584-201ENST00000391090 114 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 RNU2-52P-201ENST00000410680 190 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 RNA5SP270-201ENST00000411361 118 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.68□□□□□ -1.98
CNOT4O95628 AC244505.4-201ENST00000434905 287 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.68□□□□□ -1.98
CNOT4O95628 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.68□□□□□ -1.98
CNOT4O95628 SSXP5-201ENST00000443473 287 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 UQCRHP3-201ENST00000451503 251 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.68□□□□□ -1.98
CNOT4O95628 AC090049.2-201ENST00000550377 109 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.68□□□□□ -1.98
CNOT4O95628 AL049861.1-201ENST00000603130 150 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.68□□□□□ -1.98
CNOT4O95628 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.68□□□□□ -1.98
CNOT4O95628 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
CNOT4O95628 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CNOT4O95628 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
CNOT4O95628 AC096644.4-201ENST00000563417 2912 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 RNU6-153P-201ENST00000364422 104 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 SNORA54-201ENST00000384281 123 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.67□□□□□ -1.98
CNOT4O95628 RPL39P40-201ENST00000445481 146 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 RNU7-107P-201ENST00000459121 61 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 SNORA4.4-201ENST00000515921 135 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 RNU6-1299P-201ENST00000516316 100 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 RNU6-965P-201ENST00000516721 96 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 CYCSP26-201ENST00000534107 320 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.67□□□□□ -1.98
CNOT4O95628 AL160236.1-201ENST00000556317 195 ntBASIC2.67□□□□□ -1.98
CNOT4O95628 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.67□□□□□ -1.98
CNOT4O95628 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
CNOT4O95628 RNU6-978P-201ENST00000364371 103 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 SNORA25.7-201ENST00000364375 127 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 SNORA46-201ENST00000384762 135 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CNOT4O95628 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.66□□□□□ -1.98
CNOT4O95628 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.66□□□□□ -1.98
CNOT4O95628 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.66□□□□□ -1.98
CNOT4O95628 Y_RNA.757-201ENST00000578934 114 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.66□□□□□ -1.98
CNOT4O95628 AL929325.1-201ENST00000603096 117 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 AC090115.4-201ENST00000609970 188 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 MIR1248-201ENST00000629190 106 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 MIR203B-201ENST00000636080 86 ntBASIC2.66□□□□□ -1.98
CNOT4O95628 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
CNOT4O95628 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
CNOT4O95628 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CNOT4O95628 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.65□□□□□ -1.98
CNOT4O95628 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CNOT4O95628 AC073325.2-201ENST00000339545 159 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 RNU1-22P-201ENST00000363334 158 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.65□□□□□ -1.99
CNOT4O95628 RNU6-1336P-201ENST00000383886 109 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 Y_RNA.525-201ENST00000384570 113 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 RNU6-136P-201ENST00000384663 107 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 SNORD67-201ENST00000390833 111 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 RNU6-1064P-201ENST00000410626 104 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 EEF1A1P41-201ENST00000414667 207 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 HMGN2P18-201ENST00000450680 270 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 AC011753.1-201ENST00000451001 220 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 RN7SL75P-201ENST00000461926 281 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 AC097462.1-201ENST00000514125 324 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 RNA5SP356-201ENST00000515972 94 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 RNA5SP76-201ENST00000516277 87 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 Y_RNA.712-201ENST00000517011 92 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 RNA5SP490-201ENST00000517141 136 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 AC026271.5-201ENST00000577873 130 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 MIR2681-201ENST00000581814 105 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 MIR4438-201ENST00000585271 93 ntBASIC2.65□□□□□ -1.99
CNOT4O95628 AC245884.12-201ENST00000615364 59 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms