Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CPNE3O75131 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CPNE3O75131 RNU6-1164P-201ENST00000364428 107 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 SNORD72-201ENST00000390994 80 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 AL109933.2-201ENST00000452651 260 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 RN7SL863P-201ENST00000462370 296 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 TRBV12-1-201ENST00000479785 344 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 RNA5SP385-201ENST00000515947 110 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 AC245166.1-201ENST00000521012 253 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 AC007751.1-201ENST00000529260 376 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 MIR3169-201ENST00000578032 83 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 AC008507.4-201ENST00000585464 127 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 AL162274.2-201ENST00000614406 332 ntBASIC3.09□□□□□ -1.91
CPNE3O75131 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CPNE3O75131 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.08□□□□□ -1.92
CPNE3O75131 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CPNE3O75131 RNU6-235P-201ENST00000362644 107 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 MIR634-201ENST00000385208 97 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 RNA5SP127-201ENST00000411051 133 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 SCGB1D5P-201ENST00000515134 247 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 MIR2276-201ENST00000516886 89 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 RNU1-104P-201ENST00000517280 175 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.08□□□□□ -1.92
CPNE3O75131 AC087685.1-201ENST00000587507 141 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 AL365205.2-201ENST00000594586 68 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 AC022217.4-201ENST00000604389 163 ntBASIC3.08□□□□□ -1.92
CPNE3O75131 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CPNE3O75131 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CPNE3O75131 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.07□□□□□ -1.92
CPNE3O75131 RNU1-70P-201ENST00000362618 164 ntBASIC3.07□□□□□ -1.92
CPNE3O75131 Y_RNA.242-201ENST00000364473 110 ntBASIC3.07□□□□□ -1.92
CPNE3O75131 MIR624-201ENST00000385217 97 ntBASIC3.07□□□□□ -1.92
CPNE3O75131 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.07□□□□□ -1.92
CPNE3O75131 UBBP3-201ENST00000445497 241 ntBASIC3.07□□□□□ -1.92
CPNE3O75131 RNA5SP341-201ENST00000516261 117 ntBASIC3.07□□□□□ -1.92
CPNE3O75131 CYCSP26-201ENST00000534107 320 ntBASIC3.07□□□□□ -1.92
CPNE3O75131 MIR4506-201ENST00000584693 77 ntBASIC3.07□□□□□ -1.92
CPNE3O75131 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CPNE3O75131 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CPNE3O75131 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
CPNE3O75131 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CPNE3O75131 RNU6-215P-201ENST00000365169 102 ntBASIC3.06□□□□□ -1.92
CPNE3O75131 Y_RNA.525-201ENST00000384570 113 ntBASIC3.06□□□□□ -1.92
CPNE3O75131 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CPNE3O75131 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
CPNE3O75131 AC099677.2-201ENST00000436385 175 ntBASIC3.06□□□□□ -1.92
CPNE3O75131 RNU7-26P-201ENST00000458980 63 ntBASIC3.06□□□□□ -1.92
CPNE3O75131 AC096725.1-201ENST00000514266 313 ntBASIC3.06□□□□□ -1.92
CPNE3O75131 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CPNE3O75131 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
CPNE3O75131 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CPNE3O75131 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.05□□□□□ -1.92
CPNE3O75131 MIR422A-201ENST00000362286 90 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 SNORD68-201ENST00000363214 84 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 RNU1-91P-201ENST00000364746 163 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 MIR522-201ENST00000385071 87 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 AL603914.1-201ENST00000401964 204 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 SNORA11.4-201ENST00000408823 129 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 FTH1P12-201ENST00000432137 551 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.05□□□□□ -1.92
CPNE3O75131 RNA5SP76-201ENST00000516277 87 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 Y_RNA.690-201ENST00000516603 95 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 RNU6-1270P-201ENST00000517128 108 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 MIR3129-201ENST00000581095 76 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 AC022202.1-201ENST00000613515 211 ntBASIC3.05□□□□□ -1.92
CPNE3O75131 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CPNE3O75131 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CPNE3O75131 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.05□□□□□ -1.92
CPNE3O75131 RNU6-834P-201ENST00000362367 110 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 Y_RNA.52-201ENST00000362760 96 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 SNORA1-201ENST00000384107 130 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 SNORD61-201ENST00000384252 73 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 Y_RNA.563-201ENST00000384707 108 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 MIR29C-201ENST00000385231 88 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 MIR802-201ENST00000390235 94 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 RNA5SP229-201ENST00000410809 99 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 AC021205.2-201ENST00000480069 347 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 Y_RNA.666-201ENST00000516187 112 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 SCARNA13-201ENST00000516672 275 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 RNU2-60P-201ENST00000517290 128 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 AC091544.4-201ENST00000555268 342 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 MIR3126-201ENST00000577443 74 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 MIR3121-201ENST00000579680 77 ntBASIC3.04□□□□□ -1.92
CPNE3O75131 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CPNE3O75131 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CPNE3O75131 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.04□□□□□ -1.92
CPNE3O75131 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.03□□□□□ -1.92
CPNE3O75131 AL136360.1-201ENST00000503377 1900 ntBASIC3.03□□□□□ -1.92
CPNE3O75131 RNU6-1325P-201ENST00000364905 105 ntBASIC3.03□□□□□ -1.92
CPNE3O75131 SNORD24-201ENST00000383884 75 ntBASIC3.03□□□□□ -1.92
CPNE3O75131 RNU6-1056P-201ENST00000383996 107 ntBASIC3.03□□□□□ -1.92
CPNE3O75131 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
CPNE3O75131 RN7SKP123-201ENST00000410732 291 ntBASIC3.03□□□□□ -1.92
CPNE3O75131 AL158823.1-201ENST00000418441 478 ntBASIC3.03□□□□□ -1.92
CPNE3O75131 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.03□□□□□ -1.92
CPNE3O75131 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.03□□□□□ -1.92
CPNE3O75131 CST9LP2-201ENST00000437612 320 ntBASIC3.03□□□□□ -1.92
CPNE3O75131 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms